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H1-16-all-fractions_k255_2804009

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_2804009_1
Geminocystis sp. NIES-3709, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3..7532
DNA (7530bp) protein (2510aa)
Hemolysin-type calcium-binding region n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CK92_9RHOB
Alkaline phosphatase {ECO:0000313|EMBL:BAQ65934.1}; TaxID=1617448 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3709.;"
rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
H1-16-all-fractions_k255_2804009_2
unknown

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comp(7545..7844)
DNA (300bp) protein (100aa)

This feature has no annotations

H1-16-all-fractions_k255_2804009_3
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7959..9368
DNA (1410bp) protein (470aa)
Amino acid permease n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQ93_9SPHN
amino acid permease
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
H1-16-all-fractions_k255_2804009_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9365..9973
DNA (609bp) protein (203aa)
Cyclophilin type peptidyl-prolyl cis-trans isomerase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZR8_9SPHN
cyclophilin type peptidyl-prolyl cis-trans isomerase
Cyclophilin type peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:AGH49001.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-16-all-fractions_k255_2804009_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9970..10605)
DNA (636bp) protein (212aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Carbonic anhydrase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SBC6_9SPHN
carbonate dehydratase
H1-16-all-fractions_k255_2804009_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10635..11603
DNA (969bp) protein (323aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
radical SAM protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003806402
lipA; lipoic acid synthetase
H1-16-all-fractions_k255_2804009_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11693..12226
DNA (534bp) protein (178aa)
cyclase n=1 Tax=Sphingomonas elodea RepID=UPI0002631731
Putative polyketide cyclase {ECO:0000313|EMBL:GAO38514.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
putative oligoketide cyclase
H1-16-all-fractions_k255_2804009_8
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12169..12699)
DNA (531bp) protein (177aa)
CinA domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2U8_SPHWW
CinA domain-containing protein
CinA domain protein {ECO:0000313|EMBL:ABQ66614.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H1-16-all-fractions_k255_2804009_9
unknown

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comp(12692..13000)
DNA (309bp) protein (103aa)

This feature has no annotations

H1-16-all-fractions_k255_2804009_10
unknown

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comp(12997..13200)
DNA (204bp) protein (68aa)

This feature has no annotations

H1-16-all-fractions_k255_2804009_11
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13194..14360)
DNA (1167bp) protein (389aa)
ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein (EC:4.6.1.12)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489762
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-16-all-fractions_k255_2804009_12
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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14415..15452
DNA (1038bp) protein (346aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
tRNA-dihydrouridine synthase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000360E5EC
nifR3 family TIM-barrel protein
H1-16-all-fractions_k255_2804009_13
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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15527..15832
DNA (306bp) protein (102aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RWQ6_9SPHN
Two-component histidine kinase NtrY {ECO:0000313|EMBL:GAO38518.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
multi-sensor signal transduction histidine kinase
Displaying 13 items

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