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H1-16-all-fractions_k255_2928913

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_2928913_1
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1355
DNA (1353bp) protein (451aa)
ileS; isoleucyl-tRNA ligase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Isoleucine--tRNA ligase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SGF7_9SPHN
H1-16-all-fractions_k255_2928913_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1348..1908
DNA (561bp) protein (187aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Lipoprotein signal peptidase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILG2_9SPHN
lspA; lipoprotein signal peptidase
H1-16-all-fractions_k255_2928913_3
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1911..2330
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A392
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49685.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-16-all-fractions_k255_2928913_4
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2335..3015)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A38E
Uncharacterized protein {ECO:0000313|EMBL:EDL47774.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
hypothetical protein
H1-16-all-fractions_k255_2928913_5
unknown

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3097..3456
DNA (360bp) protein (120aa)

This feature has no annotations

H1-16-all-fractions_k255_2928913_6

Not on your lists

comp(3453..4745)
DNA (1293bp) protein (431aa)
Mechanosensitive ion channel n=1 Tax=uncultured organism RepID=T1W7A8_9ZZZZ
Mechanosensitive ion channel {ECO:0000313|EMBL:AGU10015.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
mechanosensitive ion channel protein MscS
H1-16-all-fractions_k255_2928913_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4742..5914)
DNA (1173bp) protein (391aa)
cystathionine beta-lyase n=1 Tax=Sphingomonas wittichii RepID=UPI0002F593E1
cystathionine beta-lyase
Cystathionine beta-lyase {ECO:0000313|EMBL:ABQ70121.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H1-16-all-fractions_k255_2928913_8
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5911..6756)
DNA (846bp) protein (282aa)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GNK7_SPHAL
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
3-mercaptopyruvate sulfurtransferase
H1-16-all-fractions_k255_2928913_9
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6753..8783)
DNA (2031bp) protein (677aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000371659F
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
H1-16-all-fractions_k255_2928913_10
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8894..9421)
DNA (528bp) protein (176aa)
Xanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:CCW16435.1}; EC=2.4.2.22 {ECO:0000313|EMBL:CCW16435.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
phosphoribosyltransferase n=1 Tax=Sphingobium xenophagum RepID=UPI0002DC4DE4
phosphoribosyltransferase
H1-16-all-fractions_k255_2928913_11
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9495..11525)
DNA (2031bp) protein (677aa)
endothelin-converting protein 1 (EC:3.4.24.71)
Putative metalloendopeptidase n=1 Tax=Caulobacter crescentus OR37 RepID=R0ELA6_CAUCE
Putative metalloendopeptidase {ECO:0000313|EMBL:ENZ81902.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
H1-16-all-fractions_k255_2928913_12
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11604..12056)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZF2_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:KJV37290.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
H1-16-all-fractions_k255_2928913_13
unknown

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comp(12071..12265)
DNA (195bp) protein (65aa)

This feature has no annotations

H1-16-all-fractions_k255_2928913_14
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12255..12488)
DNA (234bp) protein (78aa)
Cro/Cl family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC5E2
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:GAM00189.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
XRE family transcriptional regulator
H1-16-all-fractions_k255_2928913_15
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12712..13086
DNA (375bp) protein (125aa)
DNA repair protein RadC n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A398
Uncharacterized protein {ECO:0000313|EMBL:GAO40833.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H1-16-all-fractions_k255_2928913_16
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13110..13793)
DNA (684bp) protein (228aa)
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Sphingobium xenophagum RepID=UPI0003810E31
Putative methyltransferase {ECO:0000313|EMBL:GAO40834.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ubiquinone/menaquinone biosynthesis methyltransferase
H1-16-all-fractions_k255_2928913_17
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13783..14910)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037F1B67
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
peptide chain release factor 2
H1-16-all-fractions_k255_2928913_18
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14997..17522)
DNA (2526bp) protein (842aa)
penicillin-binding protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A39B
1A family penicillin-binding protein {ECO:0000313|EMBL:AGH49595.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
1A family penicillin-binding protein
H1-16-all-fractions_k255_2928913_19
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17571..18428)
DNA (858bp) protein (286aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Sphingobium baderi LL03 RepID=T0HR55_9SPHN
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EQB01775.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
cell wall hydrolase/autolysin
H1-16-all-fractions_k255_2928913_20
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18854..19453
DNA (600bp) protein (200aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Ribonuclease E n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SG66_9SPHN
Rne/Rng family ribonuclease
Displaying 20 items

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