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H1-16-all-fractions_k255_6196942

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_6196942_1
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..331)
DNA (330bp) protein (110aa)
histidine kinase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489F6C
Histidine kinase {ECO:0000313|EMBL:KKC27703.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
signal transduction histidine kinase, LytS
H1-16-all-fractions_k255_6196942_2
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(321..3128)
DNA (2808bp) protein (936aa)
peptidase M16 n=1 Tax=Sphingomonas elodea RepID=UPI00026302D1
peptidase M16
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
H1-16-all-fractions_k255_6196942_3
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3358..4107
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B367EE
ImuA protein {ECO:0000313|EMBL:GAO39603.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
protein ImuA
H1-16-all-fractions_k255_6196942_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4238..5581
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037E6CC5
protein ImuB
Protein ImuB {ECO:0000313|EMBL:AIT07914.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
H1-16-all-fractions_k255_6196942_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5787..9083
DNA (3297bp) protein (1099aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
dnaE2; DNA polymerase (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Sphingomonas elodea RepID=UPI0002632119
H1-16-all-fractions_k255_6196942_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9120..9419)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5P4_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49824.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-16-all-fractions_k255_6196942_7
unknown

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comp(9530..9796)
DNA (267bp) protein (89aa)

This feature has no annotations

H1-16-all-fractions_k255_6196942_8
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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9889..10995
DNA (1107bp) protein (369aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
thiouridylase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037671AE
H1-16-all-fractions_k255_6196942_9
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11101..12099
DNA (999bp) protein (333aa)
Signal transduction histidine kinase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V599_SPHWW
Histidine kinase {ECO:0000313|EMBL:KKC27166.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
signal transduction histidine kinase
H1-16-all-fractions_k255_6196942_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12099..12557
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H7N8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO40905.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
NUDIX hydrolase
H1-16-all-fractions_k255_6196942_11
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12554..13348)
DNA (795bp) protein (265aa)
Phenazine biosynthesis protein n=2 Tax=Sphingobium RepID=I5BHP1_9SPHN
Phenazine biosynthesis protein {ECO:0000313|EMBL:EIM69093.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
phz; phenazine biosynthesis protein
H1-16-all-fractions_k255_6196942_12
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13345..14319)
DNA (975bp) protein (325aa)
iron transporter n=1 Tax=Sphingomonas melonis RepID=UPI00036CA4CE
Putative cation efflux protein {ECO:0000313|EMBL:GAO40507.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
fieF; ferrous iron transporter
H1-16-all-fractions_k255_6196942_13
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14316..14894)
DNA (579bp) protein (193aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000255|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; Short=PNPOx {ECO:0000255|HAMAP-Rule:MF_01629};; Pyridoxal 5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_01629}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3CDDA
H1-16-all-fractions_k255_6196942_14
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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15058..16029
DNA (972bp) protein (324aa)
Heat shock protein DnaJ domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFN8_SPHWW
Molecular chaperone DnaJ {ECO:0000313|EMBL:KIY10608.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
heat shock protein DnaJ domain-containing protein
H1-16-all-fractions_k255_6196942_15
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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16036..16353
DNA (318bp) protein (106aa)
ribonuclease BN n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A32B2F
Ribonuclease BN {ECO:0000313|EMBL:EXS71345.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
ribonuclease BN
Displaying 15 items

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