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H1-16-all-fractions_k255_3013746_2

Organism: H1-16-all-fractions_metab_74

partial RP 23 / 55 BSCG 24 / 51 MC: 4 ASCG 9 / 38 MC: 5
Location: 810..1151

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 113.0
  • Bit_score: 198
  • Evalue 3.00e-48
DNA-directed RNA polymerase subunit omega n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SHK4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 113.0
  • Bit_score: 195
  • Evalue 2.30e-47
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 113.0
  • Bit_score: 198
  • Evalue 6.00e-49

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGGCGCGCGTCACCGTCGAAGATTGCGTCGACAAAATCCCCAACCGCTTCGATCTCGTCCTGCTCGCCGCCCAGCGCGCGCGCCAGGTGTCGGGCGGCGCCGAGCTGACCATCGACCGCGACCGCGACAAGAATCCGGTGGTGGCGCTGCGCGAGATCGCCGAGGAGACGGTGAAGCCGCGGCTGCTCGAGGAATCGCTCGTTTCCAGCCTCCAGCGCGTCCAGGTCGACGACGACGAGGCGCCCGACGAGGTCGGCTCGCTCTCCGCCTCGGCCGAGGCGCTGCGCCTCACCGCCGCCGCTCCGCCGCGCAACAACAATGCCGGCGGCGACTACGAATAA
PROTEIN sequence
Length: 114
MARVTVEDCVDKIPNRFDLVLLAAQRARQVSGGAELTIDRDRDKNPVVALREIAEETVKPRLLEESLVSSLQRVQVDDDEAPDEVGSLSASAEALRLTAAAPPRNNNAGGDYE*