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H1-16-all-fractions_k255_3013746

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_3013746_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..689)
DNA (687bp) protein (229aa)
Cardiolipin synthetase n=1 Tax=Sphingomonas sp. S17 RepID=F3X383_9SPHN
DNA, contig: SP626 {ECO:0000313|EMBL:GAN13748.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
cardiolipin synthetase
H1-16-all-fractions_k255_3013746_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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810..1151
DNA (342bp) protein (114aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SHK4_9SPHN
DNA-directed RNA polymerase subunit omega
H1-16-all-fractions_k255_3013746_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1129..1713
DNA (585bp) protein (195aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G235_9PSEU
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:KFC73946.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
methylated-DNA--protein-cysteine methyltransferase
H1-16-all-fractions_k255_3013746_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1710..2192)
DNA (483bp) protein (161aa)
Transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2T8_9SPHN
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGH50071.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-16-all-fractions_k255_3013746_5
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2246..2845)
DNA (600bp) protein (200aa)
Heat shock protein DnaJ domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V8S5_SPHWW
Molecular chaperone DnaJ {ECO:0000313|EMBL:KKC25640.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
heat shock protein DnaJ domain-containing protein
H1-16-all-fractions_k255_3013746_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2883..3167
DNA (285bp) protein (95aa)
Transcriptional regulator BolA n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V8S6_SPHWW
transcriptional regulator BolA
Transcriptional regulator BolA {ECO:0000313|EMBL:ABQ68692.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H1-16-all-fractions_k255_3013746_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3235..3960
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRT5_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40415.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
H1-16-all-fractions_k255_3013746_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4005..4907
DNA (903bp) protein (301aa)
pirin n=1 Tax=Sphingomonas elodea RepID=UPI000263162F
pirin
Pirin {ECO:0000313|EMBL:AJP74124.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H1-16-all-fractions_k255_3013746_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4904..5803
DNA (900bp) protein (300aa)
Alpha/beta hydrolase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S305_9SPHN
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AGH48869.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-16-all-fractions_k255_3013746_10
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5847..6299
DNA (453bp) protein (151aa)
N utilization substance protein B homolog n=1 Tax=Sphingobium baderi LL03 RepID=T0GF80_9SPHN
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
nusB; antitermination protein NusB
H1-16-all-fractions_k255_3013746_11
unknown

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6345..6413
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 11 items

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