ggKbase home page

H1-16-all-fractions_k255_350840

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_350840_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..457)
DNA (456bp) protein (152aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH {ECO:0000255|HAMAP-Rule:MF_00139}; Includes:; Phosphoribosylaminoimidazolecarboxamide formyltransferase {ECO:0000255|HAMAP-Rule:MF_00139}; EC=2.1.2.3 {ECO:0000255|HAMAP-Rule:MF_00139};; AICAR transformylase {ECO:0000255|HAMAP-Rule:MF_00139}; Includes:; IMP cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_00139}; EC=3.5.4.10 {ECO:0000255|HAMAP-Rule:MF_00139};; ATIC {ECO:0000255|HAMAP-Rule:MF_00139}; IMP synthase {ECO:0000255|HAMAP-Rule:MF_00139}; Inosinicase {ECO:0000255|HAMAP-Rule:MF_00139}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
IMP cyclohydrolase n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003774BCE
H1-16-all-fractions_k255_350840_2
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(575..1195)
DNA (621bp) protein (207aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:AIY16576.1}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:AIY16576.1};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMP9_NOCSJ
phosphoribosylglycinamide formyltransferase
H1-16-all-fractions_k255_350840_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1206..2435)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMQ0_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83085.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_350840_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2577..4358
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XUG3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23002.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
H1-16-all-fractions_k255_350840_5
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4358..5527
DNA (1170bp) protein (390aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Kynureninase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LJ41_9RHIZ
kynureninase KynU
H1-16-all-fractions_k255_350840_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5570..6208)
DNA (639bp) protein (213aa)
Transcriptional regulator TetR family n=1 Tax=Patulibacter medicamentivorans RepID=H0E2I7_9ACTN
Transcriptional regulator TetR family {ECO:0000313|EMBL:EHN12097.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
TetR family transcriptional regulator
H1-16-all-fractions_k255_350840_7
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6310..8160
DNA (1851bp) protein (617aa)
FAD-dependent oxidoreductase n=1 Tax=Rhodococcus sp. P14 RepID=UPI00029A004F
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AKE91049.1}; TaxID=191292 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
FAD-dependent oxidoreductase
H1-16-all-fractions_k255_350840_8
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8157..9719)
DNA (1563bp) protein (521aa)
Phytoene dehydrogenase-like oxidoreductase n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RXC7_MYCRN
phytoene dehydrogenase-like oxidoreductase
Phytoene dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:AEV73175.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
H1-16-all-fractions_k255_350840_9
Mycobacterium arupense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9751..10359)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PUL1_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:KKB99279.1}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycobacterium arupense.;"
TetR family transcriptional regulator
H1-16-all-fractions_k255_350840_10
Mycobacterium sp. MAC_080597_8934, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10416..10973
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NEH9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETZ59265.1}; TaxID=1335322 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium sp. MAC_080597_8934.;"
hypothetical protein
H1-16-all-fractions_k255_350840_11
unknown

Not on your lists

10995..11168
DNA (174bp) protein (58aa)

This feature has no annotations

H1-16-all-fractions_k255_350840_12
unknown

Not on your lists

11229..11408
DNA (180bp) protein (60aa)

This feature has no annotations

H1-16-all-fractions_k255_350840_13
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11469..12353)
DNA (885bp) protein (295aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Nocardioides sp. CF8 RepID=R7XUJ5_9ACTO
H1-16-all-fractions_k255_350840_14
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12369..13547)
DNA (1179bp) protein (393aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558, ECO:0000313|EMBL:AIY16571.1};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
succinyl-CoA synthetase subunit beta n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000370132D
succinyl-CoA synthetase subunit beta
H1-16-all-fractions_k255_350840_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13665..14054)
DNA (390bp) protein (130aa)
Isobutyryl-CoA mutase small subunit n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMQ6_NOCSJ
cobalamin B12-binding domain-containing protein
Isobutyryl-CoA mutase small subunit {ECO:0000313|EMBL:ABL83091.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_350840_16
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14254..15111
DNA (858bp) protein (286aa)
Peptidase M23B n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMQ7_NOCSJ
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABL83092.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_350840_17
Podospora anserina, Podospora, Sordariales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

15156..21053
DNA (5898bp) protein (1966aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP24287.1}; TaxID=515849 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; Podospora.;" source="Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383); (Pleurage anserina).;"
Member of asn/thr-rich large protein family id=5019285 bin=GWA2_Elusimicrobia_69_24 species=Methanosphaera stadtmanae genus=Methanosphaera taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
psrP; cell wall surface anchored protein
H1-16-all-fractions_k255_350840_18
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21058..23502)
DNA (2445bp) protein (815aa)
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
ATP-dependent DNA helicase PcrA n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMQ8_NOCSJ
H1-16-all-fractions_k255_350840_19
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23563..23934)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F1D8_MODMB
Uncharacterized protein {ECO:0000313|EMBL:CCH78970.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
H1-16-all-fractions_k255_350840_20
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24118..25272)
DNA (1155bp) protein (385aa)
Metallo-beta-lactamase domain protein n=1 Tax=Rhodococcus equi ATCC 33707 RepID=E9T554_COREQ
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EGD22685.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.;"
metallo-beta-lactamase superfamily protein
H1-16-all-fractions_k255_350840_21
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25382..25768
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Frankia sp. QA3 RepID=I9KDV2_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIV92243.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
H1-16-all-fractions_k255_350840_22
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25765..26433
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SN35_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83220.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_350840_23
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26523..26900
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XT77_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34949.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
H1-16-all-fractions_k255_350840_24
Tsukamurella paurometabola, Tsukamurella, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26961..28238
DNA (1278bp) protein (426aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5UYR1_TSUPD
ECF subfamily RNA polymerase sigma-24 subunit
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADG80364.1}; TaxID=521096 species="Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae; Tsukamurella.;" source="Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /; NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).;"
H1-16-all-fractions_k255_350840_25
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28304..29119
DNA (816bp) protein (272aa)
Alpha/beta hydrolase fold-1 n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UTX8_9ACTO
Alpha/beta hydrolase fold-1 {ECO:0000313|EMBL:EGD43431.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
putative hydrolase
H1-16-all-fractions_k255_350840_26
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29120..29389)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6RDL5_NOCCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCF65266.1}; TaxID=1127134 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
H1-16-all-fractions_k255_350840_27
Dermacoccus nishinomiyaensis, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29399..29827)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI000361D1F3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF40754.1}; TaxID=1274 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus nishinomiyaensis.;"
H1-16-all-fractions_k255_350840_28
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

Not on your lists

comp(29879..32431)
DNA (2553bp) protein (851aa)
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1DX39_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD39717.1, ECO:0000313|EnsemblProtists:EOD39717}; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emiliania huxleyi CCMP1516.;"
signal recognition particle-docking protein FtsY
H1-16-all-fractions_k255_350840_29
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32575..33339
DNA (765bp) protein (255aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UXH9_9ACTO
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJR11245.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
enoyl-CoA hydratase
H1-16-all-fractions_k255_350840_30
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33363..35612)
DNA (2250bp) protein (750aa)
PKD domain containing protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A6L1_METMM
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEF99312.1}; Flags: Precursor;; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
Displaying items 1-30 of 31 in total

View Taxonomy