ggKbase home page

H1-16-all-fractions_k255_819904

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_819904_1

Not on your lists

comp(2..766)
DNA (765bp) protein (255aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1256547 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_140.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=uncultured bacterium A1Q1_fos_140 RepID=L7VYQ4_9BACT
H1-16-all-fractions_k255_819904_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1026..1571)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCM0_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL79555.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_819904_3

Not on your lists

comp(1564..2691)
DNA (1128bp) protein (376aa)
recombinase RecF n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036316A3
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1256547 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_140.;"
recombinase RecF
H1-16-all-fractions_k255_819904_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2694..3599)
DNA (906bp) protein (302aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Nocardioides sp. CF8 RepID=R7XTP9_9ACTO
6-phosphogluconate dehydrogenase-like protein {ECO:0000313|EMBL:EON22380.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
H1-16-all-fractions_k255_819904_5

Not on your lists

comp(3631..4794)
DNA (1164bp) protein (388aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1256547 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_140.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=uncultured bacterium A1Q1_fos_140 RepID=L7VVD9_9BACT
H1-16-all-fractions_k255_819904_6

Not on your lists

comp(5176..6696)
DNA (1521bp) protein (507aa)
Chromosomal replication initiator protein DnaA n=1 Tax=uncultured bacterium A1Q1_fos_140 RepID=L7VQQ4_9BACT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1256547 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_140.;"
chromosomal replication initiator protein DnaA
H1-16-all-fractions_k255_819904_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7170..7307
DNA (138bp) protein (46aa)
50S ribosomal protein L34 n=1 Tax=Nocardioides sp. CF8 RepID=R7XSP4_9ACTO
50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
H1-16-all-fractions_k255_819904_8
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7663..7917
DNA (255bp) protein (85aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQV8_NOCSJ
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
hypothetical protein
H1-16-all-fractions_k255_819904_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7918..8919
DNA (1002bp) protein (334aa)
60 kDa inner membrane insertion protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQV7_NOCSJ
putative inner membrane protein translocase component YidC
60 kDa inner membrane insertion protein {ECO:0000313|EMBL:ABL84192.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_819904_10

Not on your lists

8916..9464
DNA (549bp) protein (183aa)
RNA-binding protein Jag n=1 Tax=uncultured bacterium A1Q1_fos_140 RepID=L7VVE4_9BACT
RNA-binding protein Jag {ECO:0000313|EMBL:AGC71281.1}; TaxID=1256547 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_140.;"
single-stranded nucleic acid binding R3H domain-containing protein
H1-16-all-fractions_k255_819904_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9515..10105
DNA (591bp) protein (197aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A965_THECD
methyltransferase GidB
H1-16-all-fractions_k255_819904_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10262..11236
DNA (975bp) protein (325aa)
Chromosome segregation ATPase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQV4_NOCSJ
chromosome segregation ATPase
Chromosome segregation ATPase {ECO:0000313|EMBL:ABL84189.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_819904_13
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11370..12194
DNA (825bp) protein (275aa)
Chromosome segregation DNA-binding protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XTP3_9ACTO
Chromosome segregation DNA-binding protein {ECO:0000313|EMBL:EON22370.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
chromosome partitioning protein ParB
H1-16-all-fractions_k255_819904_14
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12268..13038)
DNA (771bp) protein (257aa)
Acyltransferase family protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UZU9_9ACTO
Glycerol acyltransferase {ECO:0000313|EMBL:KJR07379.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
phospholipid/glycerol acyltransferase
H1-16-all-fractions_k255_819904_15
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13130..14347
DNA (1218bp) protein (406aa)
Aminotransferase AlaT {ECO:0000313|EMBL:KGN35620.1}; EC=2.6.1.2 {ECO:0000313|EMBL:KGN35620.1};; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
aminotransferase (EC:2.6.1.2)
Aspartate aminotransferase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TIK9_9MICO
H1-16-all-fractions_k255_819904_16
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14421..15143
DNA (723bp) protein (241aa)
GCN5-related N-acetyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQU9_NOCSJ
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABL84184.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_819904_17

Not on your lists

comp(15082..16266)
DNA (1185bp) protein (395aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AGC71286.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AGC71286.1};; TaxID=1256547 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_140.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=uncultured bacterium A1Q1_fos_140 RepID=L7VVE9_9BACT
cell wall hydrolase/autolysin
H1-16-all-fractions_k255_819904_18
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16374..16700)
DNA (327bp) protein (109aa)
Thioredoxin n=1 Tax=Nocardioides sp. CF8 RepID=R7XSU6_9ACTO
Thioredoxin {ECO:0000313|EMBL:EON22366.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
thioredoxin
H1-16-all-fractions_k255_819904_19
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16776..17762)
DNA (987bp) protein (329aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Thioredoxin reductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQU7_NOCSJ
thioredoxin reductase
H1-16-all-fractions_k255_819904_20
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17875..18750)
DNA (876bp) protein (292aa)
Uncharacterized protein {ECO:0000313|EMBL:EWT01046.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
H1-16-all-fractions_k255_819904_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18747..19451)
DNA (705bp) protein (235aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQU5_NOCSJ
RNA polymerase sigma factor SigM
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:ABL84180.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_819904_22
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19448..20605)
DNA (1158bp) protein (386aa)
Serine/threonine protein kinase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQU4_NOCSJ
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABL84179.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Displaying 22 items

View Taxonomy