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H1-16-all-fractions_k255_1313959

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_1313959_1
unknown

Not on your lists

1..399
DNA (399bp) protein (133aa)

This feature has no annotations

H1-16-all-fractions_k255_1313959_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(408..1400)
DNA (993bp) protein (331aa)
Pirin domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGC0_NOCSJ
pirin domain-containing protein
Pirin domain protein {ECO:0000313|EMBL:ABL80855.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_1313959_3
unknown

Not on your lists

comp(1441..1818)
DNA (378bp) protein (126aa)

This feature has no annotations

H1-16-all-fractions_k255_1313959_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1939..3513
DNA (1575bp) protein (525aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGB8_NOCSJ
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ABL80853.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_1313959_5
unknown

Not on your lists

comp(3676..3909)
DNA (234bp) protein (78aa)

This feature has no annotations

H1-16-all-fractions_k255_1313959_6
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4108..5355
DNA (1248bp) protein (416aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY19371.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_1313959_7
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5494..7032
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000377EFA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP54481.1}; Flags: Precursor;; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
H1-16-all-fractions_k255_1313959_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7102..9147
DNA (2046bp) protein (682aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGB9_NOCSJ
H1-16-all-fractions_k255_1313959_9
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9155..10219
DNA (1065bp) protein (355aa)
Adenine-specific methyltransferase {ECO:0000313|EMBL:AIY18307.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AIY18307.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
DNA methyltransferase n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255DEEC
DNA methyltransferase
H1-16-all-fractions_k255_1313959_10
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10210..10557)
DNA (348bp) protein (116aa)
10 kDa chaperonin n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGB1_NOCSJ
chaperonin Cpn10
10 kDa chaperonin {ECO:0000256|RuleBase:RU000535}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_1313959_11
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10568..10813)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGB0_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80845.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_1313959_12
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10862..11335
DNA (474bp) protein (158aa)
peroxiredoxin n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003818273
Peroxiredoxin {ECO:0000313|EMBL:KJR09456.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
redoxin domain-containing protein
H1-16-all-fractions_k255_1313959_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11952..12563)
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037E7B42
purine NTP phosphatase
H1-16-all-fractions_k255_1313959_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12570..13286)
DNA (717bp) protein (239aa)
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH {ECO:0000255|HAMAP-Rule:MF_00564}; Short=RNase PH {ECO:0000255|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000255|HAMAP-Rule:MF_00564};; tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_00564}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Ribonuclease PH n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=RNPH_NOCSJ
H1-16-all-fractions_k255_1313959_15

Not on your lists

comp(13372..14154)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B30035
ABC-2 family transporter protein {ECO:0000313|EMBL:AIA15151.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
H1-16-all-fractions_k255_1313959_16
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14151..15065)
DNA (915bp) protein (305aa)
ABC transporter, ATP-binding protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SD70_9ACTO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFQ83173.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
ABC transporter-like protein
H1-16-all-fractions_k255_1313959_17
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15197..16360
DNA (1164bp) protein (388aa)
Histidine kinase, dimerization and phosphoacceptor region n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG98_NOCSJ
histidine kinase, dimerisation and phosphoacceptor region
Histidine kinase, dimerization and phosphoacceptor region {ECO:0000313|EMBL:ABL80833.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_1313959_18
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16348..17028
DNA (681bp) protein (227aa)
LuxR family transcriptional regulator n=1 Tax=Thermobifida fusca TM51 RepID=R9FD46_THEFU
LuxR family transcriptional regulator
Regulatory protein, LuxR:Response regulator receiver {ECO:0000313|EMBL:AAZ56266.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
H1-16-all-fractions_k255_1313959_19
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17115..17873)
DNA (759bp) protein (253aa)
Beta-lactamase domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y103_9ACTO
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EON24945.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
metal-dependent hydrolase
H1-16-all-fractions_k255_1313959_20
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17870..18724)
DNA (855bp) protein (285aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Glutamate racemase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG94_NOCSJ
H1-16-all-fractions_k255_1313959_21
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18734..19990)
DNA (1257bp) protein (419aa)
UPI0003C7EB1B related cluster n=1 Tax=unknown RepID=UPI0003C7EB1B
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFQ81911.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
arabinose ABC transporter permease
H1-16-all-fractions_k255_1313959_22
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20030..20479)
DNA (450bp) protein (150aa)
UPI0003C7E1E9 related cluster n=1 Tax=unknown RepID=UPI0003C7E1E9
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE46334.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
H1-16-all-fractions_k255_1313959_23
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20472..20831)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SS13_AMYOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWT04932.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
H1-16-all-fractions_k255_1313959_24
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20828..21775)
DNA (948bp) protein (316aa)
cysM; cysteine synthase (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y100_9ACTO
Cysteine synthase {ECO:0000313|EMBL:EON24940.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
H1-16-all-fractions_k255_1313959_25
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21778..22050)
DNA (273bp) protein (91aa)
Thiamine S protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y028_9ACTO
Thiamine S protein {ECO:0000313|EMBL:EON24939.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
sulfur transfer protein ThiS
H1-16-all-fractions_k255_1313959_26
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22058..22525)
DNA (468bp) protein (156aa)
Mov34/MPN/PAD-1 family protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y088_9ACTO
Mov34/MPN/PAD-1 family protein {ECO:0000313|EMBL:EON24938.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Mov34/MPN/PAD-1 family protein
H1-16-all-fractions_k255_1313959_27
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22588..23469)
DNA (882bp) protein (294aa)
acid phosphatase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7850F
Acid phosphatase {ECO:0000313|EMBL:KJK57827.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
acid phosphatase
H1-16-all-fractions_k255_1313959_28
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23558..24133)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG87_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80822.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_1313959_29
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24130..24429)
DNA (300bp) protein (100aa)
ATP-dependent Clp protease ClpS n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003763865
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
Clp protease ClpS
H1-16-all-fractions_k255_1313959_30
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24443..24796)
DNA (354bp) protein (118aa)
steroid delta-isomerase (EC:5.3.3.1)
Steroid delta-isomerase {ECO:0000313|EMBL:CCA90239.1}; EC=5.3.3.1 {ECO:0000313|EMBL:CCA90239.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Steroid delta-isomerase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ID64_9SPHN
Displaying items 1-30 of 41 in total

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