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H1-16-all-fractions_k255_1959513

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_1959513_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..192)
DNA (192bp) protein (64aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ABL79692.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ABL79692.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Propionyl-CoA carboxylase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SD07_NOCSJ
H1-16-all-fractions_k255_1959513_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

297..845
DNA (549bp) protein (183aa)
Transcriptional regulator, TetR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SD00_NOCSJ
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABL79685.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_1959513_3
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

944..1768
DNA (825bp) protein (275aa)
Uncharacterized protein (Fragment) n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MQ99_9ACTO
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ADP82538.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
H1-16-all-fractions_k255_1959513_4
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1842..2468
DNA (627bp) protein (209aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|PIRNR:PIRNR026671};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Peptidase M15D vanX D-ala-D-ala dipeptidase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H890_CELFA
dipeptidase
H1-16-all-fractions_k255_1959513_5
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2465..3619
DNA (1155bp) protein (385aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Alanine racemase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMF0_NOCSJ
alanine racemase
H1-16-all-fractions_k255_1959513_6
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3616..4578
DNA (963bp) protein (321aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
D-alanine--D-alanine ligase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H888_CELFA
D-alanine--D-alanine ligase
H1-16-all-fractions_k255_1959513_7
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4575..5834
DNA (1260bp) protein (420aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H886_CELFA
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEE44643.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
H1-16-all-fractions_k255_1959513_8

Not on your lists

5831..6508
DNA (678bp) protein (226aa)
Two-component system, regulatory protein n=1 Tax=uncultured bacterium esnapd15 RepID=S5UBK3_9BACT
Two-component system, regulatory protein {ECO:0000313|EMBL:AGS49749.1}; TaxID=1366595 species="Bacteria; environmental samples.;" source="uncultured bacterium esnapd15.;"
LuxR family transcriptional regulator
H1-16-all-fractions_k255_1959513_9
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6538..7554
DNA (1017bp) protein (339aa)
RelA/SpoT domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XUA8_9ACTO
GTP pyrophosphokinase {ECO:0000313|EMBL:KEP24200.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
RelA/SpoT domain-containing protein
H1-16-all-fractions_k255_1959513_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7586..9673)
DNA (2088bp) protein (696aa)
DEAD/DEAH box helicase domain-containing n=1 Tax=Nocardioides sp. CF8 RepID=R7Y2D8_9ACTO
DEAD/DEAH box helicase domain-containing {ECO:0000313|EMBL:EON25741.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
DEAD/DEAH box helicase
H1-16-all-fractions_k255_1959513_11
unknown

Not on your lists

comp(9683..11020)
DNA (1338bp) protein (446aa)

This feature has no annotations

H1-16-all-fractions_k255_1959513_12
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11020..12972)
DNA (1953bp) protein (651aa)
endothelin-converting protein 1 (EC:3.4.24.71)
peptidase M13 n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI000364ADBB
Endothelin-converting protein 1 {ECO:0000313|EMBL:EON25811.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
H1-16-all-fractions_k255_1959513_13
unknown

Not on your lists

comp(13020..13478)
DNA (459bp) protein (153aa)

This feature has no annotations

H1-16-all-fractions_k255_1959513_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13514..14491)
DNA (978bp) protein (326aa)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCZ0_NOCSJ
alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:ABL79675.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_1959513_15
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14521..15279
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000373D050
Uncharacterized protein {ECO:0000313|EMBL:EWT01516.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
ABC transporter permease
H1-16-all-fractions_k255_1959513_16
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15304..16500)
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UPP5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGD44869.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
H1-16-all-fractions_k255_1959513_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16560..17201)
DNA (642bp) protein (214aa)
Regulatory protein TetR n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J4Z8_9PSEU
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AIY19619.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_1959513_18
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17238..17429)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI00035DB3D6
ferredoxin
Uncharacterized protein {ECO:0000313|EMBL:AIY15654.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_1959513_19
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17435..18979)
DNA (1545bp) protein (515aa)
Alkane 1-monooxygenase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y2N8_9ACTO
Alkane 1-monooxygenase {ECO:0000313|EMBL:EON25798.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
alkane 1-monooxygenase
H1-16-all-fractions_k255_1959513_20
unknown

Not on your lists

comp(19098..19532)
DNA (435bp) protein (145aa)

This feature has no annotations

H1-16-all-fractions_k255_1959513_21
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19543..20136)
DNA (594bp) protein (198aa)
Nitroreductase family protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UPP1_9ACTO
Nitroreductase family protein {ECO:0000313|EMBL:EGD44865.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
tdsD; Nitroreductase
H1-16-all-fractions_k255_1959513_22
unknown

Not on your lists

comp(20239..20703)
DNA (465bp) protein (155aa)

This feature has no annotations

H1-16-all-fractions_k255_1959513_23
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20827..21144
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N168_9ACTO
Acetyltransferase {ECO:0000313|EMBL:KGN31328.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
H1-16-all-fractions_k255_1959513_24
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21141..22037
DNA (897bp) protein (299aa)
short-chain dehydrogenase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6E1C1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEF41340.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
H1-16-all-fractions_k255_1959513_25
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22034..22669)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WW34_MYCKA
Uncharacterized protein {ECO:0000313|EMBL:EUA14642.1}; TaxID=1299327 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
hypothetical protein
H1-16-all-fractions_k255_1959513_26
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22710..24857)
DNA (2148bp) protein (716aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI0003693435
MmpL domain-containing protein
MmpL domain-containing protein {ECO:0000313|EMBL:ADP80208.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
H1-16-all-fractions_k255_1959513_27
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24968..25576)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037A4D8C
LuxR family transcriptional regulator {ECO:0000313|EMBL:KGN34194.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
two component LuxR family transcriptional regulator
Displaying 27 items

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