ggKbase home page

H1-16-all-fractions_k255_2107700

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_2107700_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..267)
DNA (267bp) protein (89aa)
Thiosulfate sulfurtransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPJ2_NOCSJ
rhodanese domain-containing protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2107700_2
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(264..743)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPJ3_NOCSJ
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AIY18875.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_2107700_3
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1040..2230)
DNA (1191bp) protein (397aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFQ84303.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFQ84303.1};; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S933_9ACTO
lipopolysaccharide biosynthesis protein
H1-16-all-fractions_k255_2107700_4
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2238..3215)
DNA (978bp) protein (326aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AIY18912.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AIY18912.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Epimerase n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JPI5_STRHJ
NAD-dependent dehydratase
H1-16-all-fractions_k255_2107700_5
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3384..4361
DNA (978bp) protein (326aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955, ECO:0000313|EMBL:AIY18909.1}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955, ECO:0000313|EMBL:AIY18909.1};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
GDP-mannose 4,6-dehydratase n=1 Tax=Streptomyces sp. C RepID=D9VZI8_9ACTO
GDP-D-mannose dehydratase
H1-16-all-fractions_k255_2107700_6
unknown

Not on your lists

4379..5164
DNA (786bp) protein (262aa)
UPI0003C7E72D related cluster n=1 Tax=unknown RepID=UPI0003C7E72D
H1-16-all-fractions_k255_2107700_7
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5246..6052
DNA (807bp) protein (269aa)
UPI0003C7E72D related cluster n=1 Tax=unknown RepID=UPI0003C7E72D
Uncharacterized protein {ECO:0000313|EMBL:EFQ82067.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
H1-16-all-fractions_k255_2107700_8
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6080..7042)
DNA (963bp) protein (321aa)
UPI0003C7E8A7 related cluster n=1 Tax=unknown RepID=UPI0003C7E8A7
Uncharacterized protein {ECO:0000313|EMBL:EFQ82068.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
hypothetical protein
H1-16-all-fractions_k255_2107700_9
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7330..8034)
DNA (705bp) protein (235aa)
Methyltransferase, FkbM family n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SFF9_9ACTO
Methyltransferase, FkbM family {ECO:0000313|EMBL:EFQ82060.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
hypothetical protein
H1-16-all-fractions_k255_2107700_10
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8120..9496
DNA (1377bp) protein (459aa)
Polysaccharide biosynthesis protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SFG5_9ACTO
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFQ82066.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
H1-16-all-fractions_k255_2107700_11
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9486..10226)
DNA (741bp) protein (247aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SFG4_9ACTO
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFQ82065.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
3-oxoacyl-ACP reductase
H1-16-all-fractions_k255_2107700_12
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10226..10468)
DNA (243bp) protein (81aa)
UPI0003C80181 related cluster n=1 Tax=unknown RepID=UPI0003C80181
Uncharacterized protein {ECO:0000313|EMBL:EFQ82063.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
hypothetical protein
H1-16-all-fractions_k255_2107700_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10623..10925)
DNA (303bp) protein (101aa)
ThiamineS protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPK1_NOCSJ
Molybdenum cofactor biosynthesis protein MoaD {ECO:0000313|EMBL:AIY20129.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
thiamine biosynthesis protein ThiS
H1-16-all-fractions_k255_2107700_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11043..11759
DNA (717bp) protein (239aa)
Transcriptional regulator domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPK2_NOCSJ
transcriptional regulator domain-containing protein
Transcriptional regulator domain protein {ECO:0000313|EMBL:ABL83737.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2107700_15
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11756..12673
DNA (918bp) protein (306aa)
Mycothiol acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01698, ECO:0000256|SAAS:SAAS00034899}; Short=MSH acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01698};; EC=2.3.1.189 {ECO:0000256|HAMAP-Rule:MF_01698, ECO:0000256|SAAS:SAAS00034900};; Mycothiol synthase {ECO:0000256|HAMAP-Rule:MF_01698}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Mycothiol acetyltransferase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EMI4_9NOCA
mycothiol acetyltransferase
H1-16-all-fractions_k255_2107700_16
unknown

Not on your lists

12670..12780
DNA (111bp) protein (37aa)

This feature has no annotations

H1-16-all-fractions_k255_2107700_17
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12773..13825)
DNA (1053bp) protein (351aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPL8_NOCSJ
alpha/beta hydrolase domain-containing protein
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:ABL83753.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2107700_18
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13890..16061
DNA (2172bp) protein (724aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPL9_NOCSJ
H1-16-all-fractions_k255_2107700_19
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16114..17055
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A671_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH88221.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
H1-16-all-fractions_k255_2107700_20
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17045..18121)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPM7_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83762.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2107700_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18175..19077
DNA (903bp) protein (301aa)
NUDIX hydrolase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPM6_NOCSJ
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABL83761.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2107700_22
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19230..20321
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000363C4C4
phosphate ABC transporter, periplasmic phosphate-binding protein
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; Flags: Precursor;; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
H1-16-all-fractions_k255_2107700_23
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20357..21280
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003661477
phosphate ABC transporter permease
Phosphate ABC transporter, inner membrane subunit PstC {ECO:0000313|EMBL:ADB77197.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
H1-16-all-fractions_k255_2107700_24
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21277..22347
DNA (1071bp) protein (357aa)
phosphate ABC transporter permease n=1 Tax=Saccharomonospora saliphila RepID=UPI000366783E
phosphate ABC transporter permease
Phosphate ABC transporter membrane protein 2, PhoT family {ECO:0000313|EMBL:ABL83758.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2107700_25
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22356..23135
DNA (780bp) protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
phosphate ABC transporter ATP-binding protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000378BE83
phosphate ABC transporter ATPase
H1-16-all-fractions_k255_2107700_26
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23206..24099)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SDF2_INTC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU47574.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
H1-16-all-fractions_k255_2107700_27
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24260..25264)
DNA (1005bp) protein (335aa)
Phosphate transporter n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPM1_NOCSJ
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:ABL83756.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2107700_28
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25268..25885)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPM0_NOCSJ
phosphate transport regulator
Phosphate transport regulator {ECO:0000313|EMBL:AIY18920.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_2107700_29
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25993..26139)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UXA3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGD42333.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
H1-16-all-fractions_k255_2107700_30
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26274..26477)
DNA (204bp) protein (68aa)
cold-shock protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000360C557
Cold-shock protein {ECO:0000313|EMBL:KJR10871.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
cold-shock DNA-binding protein family protein
Displaying items 1-30 of 32 in total

View Taxonomy