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H1-16-all-fractions_k255_2167021

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_2167021_1
unknown

Not on your lists

2..214
DNA (213bp) protein (71aa)

This feature has no annotations

H1-16-all-fractions_k255_2167021_2
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(204..1073)
DNA (870bp) protein (290aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591, ECO:0000313|EMBL:AIY18724.1}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591, ECO:0000313|EMBL:AIY18724.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
pyridoxamine kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349F466
pyridoxamine kinase
H1-16-all-fractions_k255_2167021_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1201..2823
DNA (1623bp) protein (541aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNW7_NOCSJ
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ABL83502.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
glucose-methanol-choline oxidoreductase
H1-16-all-fractions_k255_2167021_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2932..3720)
DNA (789bp) protein (263aa)
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNW5_NOCSJ
extradiol ring-cleavage dioxygenase III subunit B
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B {ECO:0000313|EMBL:ABL83500.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2167021_5
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3777..4463)
DNA (687bp) protein (229aa)
uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00148}; Short=UDG {ECO:0000255|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000255|HAMAP-Rule:MF_00148};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Uracil-DNA glycosylase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=UNG_NOCSJ
H1-16-all-fractions_k255_2167021_6
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4473..5369)
DNA (897bp) protein (299aa)
cell wall protein n=1 Tax=Streptomyces RepID=UPI0002000492
hypothetical protein
Putative secreted hydrolase {ECO:0000313|EMBL:AIY19070.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_2167021_7
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5397..6269)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q1M6_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00597.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-16-all-fractions_k255_2167021_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6266..7675)
DNA (1410bp) protein (470aa)
Alpha/beta hydrolase fold protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNV7_NOCSJ
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ABL83492.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2167021_9
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7742..9286
DNA (1545bp) protein (515aa)
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:AIY18917.1}; EC=1.4.7.1 {ECO:0000313|EMBL:AIY18917.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
glutamate synthase n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI000380E07A
glutamate synthase
H1-16-all-fractions_k255_2167021_10
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9283..10107
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00035EA166
Short-chain dehydrogenase {ECO:0000313|EMBL:KHL04340.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
short chain dehydrogenase
H1-16-all-fractions_k255_2167021_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10104..11495)
DNA (1392bp) protein (464aa)
Diacylglycerol O-acyltransferase {ECO:0000256|RuleBase:RU361241}; EC=2.3.1.20 {ECO:0000256|RuleBase:RU361241};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Diacylglycerol O-acyltransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XUE9_9ACTO
hypothetical protein
H1-16-all-fractions_k255_2167021_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11512..12933)
DNA (1422bp) protein (474aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Trehalose 6-phosphate synthase {ECO:0000313|EMBL:ABL83491.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ABL83491.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Trehalose 6-phosphate synthase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNV6_NOCSJ
H1-16-all-fractions_k255_2167021_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13160..13456
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNV3_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83488.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2167021_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13504..14007
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNV2_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83487.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2167021_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14042..14893
DNA (852bp) protein (284aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Trehalose 6-phosphatase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNV1_NOCSJ
HAD family hydrolase
H1-16-all-fractions_k255_2167021_16
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15119..16384
DNA (1266bp) protein (422aa)
Threonine synthase {ECO:0000313|EMBL:EFQ82507.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EFQ82507.1};; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SDD0_9ACTO
H1-16-all-fractions_k255_2167021_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16415..16690
DNA (276bp) protein (92aa)
molybdenum cofactor biosynthesis protein MoaD n=1 Tax=Actinomadura flavalba RepID=UPI00037F0D98
Thiamine S protein {ECO:0000313|EMBL:EON25261.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
sulfur transfer protein ThiS
H1-16-all-fractions_k255_2167021_18
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16692..17084
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036480BD
Uncharacterized protein {ECO:0000313|EMBL:EME16430.1}; TaxID=1278077 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;"
H1-16-all-fractions_k255_2167021_19
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17227..17871
DNA (645bp) protein (215aa)
Integral membrane protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TG61_9MICO
F420-dependent oxidoreductase {ECO:0000313|EMBL:KGN39263.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
hypothetical protein
H1-16-all-fractions_k255_2167021_20
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17846..18724)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003804B55
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ABL83334.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2167021_21
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18752..19969)
DNA (1218bp) protein (406aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PR26_KRIFD
putative ECF subfamily RNA polymerase sigma-24 subunit
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB32974.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
H1-16-all-fractions_k255_2167021_22
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19974..20330)
DNA (357bp) protein (119aa)
Dgpf domain protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UXM8_9ACTO
transcription initiation protein
Uncharacterized protein {ECO:0000313|EMBL:AIY18703.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_2167021_23
Mycobacterium immunogenum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20450..21493
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Mycobacterium marinum str. Europe RepID=S7R433_MYCMR
Um strain SMUC14 PROKKA_contig000044, whole genome shotgun sequence {ECO:0000313|EMBL:KIU37710.1}; TaxID=83262 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium immunogenum.;"
hypothetical protein
H1-16-all-fractions_k255_2167021_24
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21490..22317
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNU5_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83480.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_2167021_25
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22517..23281
DNA (765bp) protein (255aa)
60 kDa chaperonin 2 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=CH602_NOCSJ
groEL; chaperonin GroEL
60 kDa chaperonin 2 {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein 2 {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 2 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Displaying 25 items

View Taxonomy