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H1-16-all-fractions_k255_3705758

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_3705758_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..708)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A2706
Uncharacterized protein {ECO:0000313|EMBL:EAR24876.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
H1-16-all-fractions_k255_3705758_2
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(771..1187)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000361B951
HcpC {ECO:0000313|EMBL:EAR24877.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
copper binding protein of plastocyanin/azurin family
H1-16-all-fractions_k255_3705758_3
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1187..1639)
DNA (453bp) protein (151aa)
Integral membrane protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QET1_CATAD
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:ACU72851.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
H1-16-all-fractions_k255_3705758_4
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1683..2489)
DNA (807bp) protein (269aa)
Membrane protein n=1 Tax=Rhodococcus erythropolis DN1 RepID=T5HX60_RHOER
Membrane protein {ECO:0000313|EMBL:KIM16676.1}; TaxID=1833 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter picolinophilus).;"
membrane protein
H1-16-all-fractions_k255_3705758_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2486..3772)
DNA (1287bp) protein (429aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Nocardioides sp. CF8 RepID=R7XTU7_9ACTO
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EON22445.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
cyclopropane-fatty-acyl-phospholipid synthase
H1-16-all-fractions_k255_3705758_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3769..5070)
DNA (1302bp) protein (434aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI00037BD7E8
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EON22444.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
H1-16-all-fractions_k255_3705758_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5067..7085)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XT14_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22443.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
H1-16-all-fractions_k255_3705758_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7088..7804)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQE8_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL84033.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_3705758_9
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7801..8400)
DNA (600bp) protein (200aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V0P0_9ACTO
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EGD40929.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
RNA polymerase sigma factor SigK
H1-16-all-fractions_k255_3705758_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8704..9678
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037BA261
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EON24800.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
methionine synthase, vitamin-B12 independent
H1-16-all-fractions_k255_3705758_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9739..11406)
DNA (1668bp) protein (556aa)
EmrB/QacA family drug resistance transporter n=1 Tax=Nocardioides sp. CF8 RepID=R7XZM2_9ACTO
EmrB/QacA family drug resistance transporter {ECO:0000313|EMBL:EON24802.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
EmrB/QacA family drug resistance transporter
H1-16-all-fractions_k255_3705758_12
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11403..12059)
DNA (657bp) protein (219aa)
Transcriptional regulator, TetR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMA6_NOCSJ
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AIY18387.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_3705758_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12344..16234
DNA (3891bp) protein (1297aa)
Outer membrane adhesin like proteiin n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NV46_STRVO
Fibronectin type III domain protein {ECO:0000313|EMBL:AIY16711.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
H1-16-all-fractions_k255_3705758_14
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16270..19680
DNA (3411bp) protein (1137aa)
Outer membrane adhesin-like protein (Fragment) n=1 Tax=Streptomyces auratus AGR0001 RepID=J1RRB6_9ACTO
Fibronectin type III domain protein {ECO:0000313|EMBL:AJR18229.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
outer membrane adhesin-like protein
H1-16-all-fractions_k255_3705758_15
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19744..20496)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R807_STRVP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA58816.1}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
H1-16-all-fractions_k255_3705758_16
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20613..21254)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI000367E1D9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY16974.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_3705758_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21351..23441
DNA (2091bp) protein (697aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000313|EMBL:AIY20046.1}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000313|EMBL:AIY20046.1};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
DNA ligase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=DNLJ_NOCSJ
NAD-dependent DNA ligase LigA
H1-16-all-fractions_k255_3705758_18
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23451..24503
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00038071A2
NAD dependent epimerase/dehydratase family protein
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:AHH18473.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
H1-16-all-fractions_k255_3705758_19
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24617..24916
DNA (300bp) protein (100aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Nocardioides sp. CF8 RepID=R7XV55_9ACTO
H1-16-all-fractions_k255_3705758_20
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24913..25503
DNA (591bp) protein (197aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMA1_NOCSJ
Displaying 20 items

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