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H1-16-all-fractions_k255_3921858

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_3921858_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..3366)
DNA (3366bp) protein (1122aa)
ATP-dependent helicase HrpA n=1 Tax=Nocardioides sp. CF8 RepID=R7XU18_9ACTO
ATP-dependent helicase HrpA {ECO:0000313|EMBL:EON22867.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ATP-dependent helicase HrpA
H1-16-all-fractions_k255_3921858_2
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3487..3924)
DNA (438bp) protein (146aa)
Translation initiation factor IF-2 n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V0J9_9ACTO
Translation initiation factor IF-2 {ECO:0000313|EMBL:EGD41133.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
H1-16-all-fractions_k255_3921858_3
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4063..4794
DNA (732bp) protein (244aa)
DNA-binding response regulator TrcR n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V1S2_9ACTO
Putative two-component regulatory system (Putative response regulator) {ECO:0000313|EMBL:CCH74914.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
transcriptional regulator
H1-16-all-fractions_k255_3921858_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4791..6212
DNA (1422bp) protein (474aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000374A366
ATPase domain-containing protein
H1-16-all-fractions_k255_3921858_5
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6231..6920)
DNA (690bp) protein (230aa)
Methyltransferase domain protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SFF6_9ACTO
Methyltransferase domain protein {ECO:0000313|EMBL:EFQ82057.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
hypothetical protein
H1-16-all-fractions_k255_3921858_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7003..8139)
DNA (1137bp) protein (379aa)
UPI0003C7F9DA related cluster n=1 Tax=unknown RepID=UPI0003C7F9DA
Uncharacterized protein {ECO:0000313|EMBL:KJL39425.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
H1-16-all-fractions_k255_3921858_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8142..9239)
DNA (1098bp) protein (366aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SFF8_9ACTO
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:BAP56005.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
H1-16-all-fractions_k255_3921858_8
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9321..10295)
DNA (975bp) protein (325aa)
NAD-dependent dehydratase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7A173
dTDP-glucose 4-6-dehydratase
dTDP-glucose 4-6-dehydratase {ECO:0000313|EMBL:ADP98151.1}; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter adhaerens (strain HP15).;"
H1-16-all-fractions_k255_3921858_9
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10379..11548
DNA (1170bp) protein (390aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=1 Tax=Promicromonospora sukumoe RepID=UPI000367821D
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93001.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
H1-16-all-fractions_k255_3921858_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11549..12172)
DNA (624bp) protein (208aa)
Regulatory protein, TetR n=1 Tax=Nocardioides sp. CF8 RepID=R7XU95_9ACTO
Regulatory protein, TetR {ECO:0000313|EMBL:EON22868.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
regulatory protein TetR
H1-16-all-fractions_k255_3921858_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12224..13729
DNA (1506bp) protein (502aa)
Putative monooxygenase n=1 Tax=Nocardioides sp. CF8 RepID=R7XU57_9ACTO
Putative monooxygenase {ECO:0000313|EMBL:EON22869.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
putative monooxygenase
H1-16-all-fractions_k255_3921858_12
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13726..14559
DNA (834bp) protein (278aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nocardioides sp. CF8 RepID=R7XV36_9ACTO
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EON22870.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
short-chain dehydrogenase/reductase SDR
H1-16-all-fractions_k255_3921858_13
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14584..15087
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3B6S2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EFP59256.1}; TaxID=188626 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
hypothetical protein
H1-16-all-fractions_k255_3921858_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15125..15808)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6HMU9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP79801.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
H1-16-all-fractions_k255_3921858_15
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15838..16977
DNA (1140bp) protein (380aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (strain 103S) (Corynebacterium equi).;"
Carboxylate-amine ligase REQ_38820 n=3 Tax=Corynebacterium equii RepID=E4W8U2_RHOE1
carboxylate-amine ligase
H1-16-all-fractions_k255_3921858_16
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17015..17569
DNA (555bp) protein (185aa)
isochorismatase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037DBFD0
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:AHH96855.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-16-all-fractions_k255_3921858_17
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17566..18690)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SN19_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83204.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_3921858_18
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18668..20167)
DNA (1500bp) protein (500aa)
aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SFI6_NOCSJ
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_3921858_19
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20297..21697
DNA (1401bp) protein (467aa)
Diacylglycerol O-acyltransferase {ECO:0000256|RuleBase:RU361241}; EC=2.3.1.20 {ECO:0000256|RuleBase:RU361241};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Diacylglycerol O-acyltransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XU24_9ACTO
diacylglycerol O-acyltransferase
H1-16-all-fractions_k255_3921858_20
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21698..22006)
DNA (309bp) protein (103aa)
Helix-turn-helix domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XX72_9ACTO
DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:AIY17833.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_3921858_21
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22090..22791)
DNA (702bp) protein (234aa)
Regulatory protein, LuxR n=1 Tax=Nocardioides sp. CF8 RepID=R7XVI5_9ACTO
response regulator receiver protein
Regulatory protein, LuxR {ECO:0000313|EMBL:EON23323.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
H1-16-all-fractions_k255_3921858_22
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22801..23316)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000374AC72
Flavin reductase {ECO:0000313|EMBL:KJK13320.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
flavin reductase domain-containing protein
H1-16-all-fractions_k255_3921858_23
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23313..24437)
DNA (1125bp) protein (375aa)
Two-component system sensor kinase n=1 Tax=Nocardioides sp. CF8 RepID=R7XVK0_9ACTO
histidine kinase
Two-component system sensor kinase {ECO:0000313|EMBL:AIY17167.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_3921858_24
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24441..25205)
DNA (765bp) protein (255aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLC1_NOCSJ
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ABL82606.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_3921858_25
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25274..26059
DNA (786bp) protein (262aa)
Alpha/beta hydrolase fold protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLC2_NOCSJ
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ABL82607.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_3921858_26
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26056..26469
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XVG8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23329.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
H1-16-all-fractions_k255_3921858_27
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26513..27553
DNA (1041bp) protein (347aa)
LOR/SDH bifunctional enzyme conserved domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLC4_NOCSJ
LOR/SDH bifunctional protein
LOR/SDH bifunctional enzyme conserved domain protein {ECO:0000313|EMBL:ABL82609.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Displaying 27 items

View Taxonomy