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H1-16-all-fractions_k255_5158799

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_5158799_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..528
DNA (528bp) protein (176aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=RPOA_NOCSJ
H1-16-all-fractions_k255_5158799_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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635..1303
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000368DDC5
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5158799_3
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1372..2220
DNA (849bp) protein (283aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:AIY16505.1}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
tRNA pseudouridine synthase A n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNI4_NOCSJ
pseudouridine synthase
H1-16-all-fractions_k255_5158799_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2217..3242
DNA (1026bp) protein (342aa)
Aldo/keto reductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SF18_NOCSJ
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABL80403.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5158799_5
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3296..4966)
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036C90DB
Thioredoxin reductase {ECO:0000313|EMBL:EWT00789.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
thioredoxin reductase
H1-16-all-fractions_k255_5158799_6
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5018..5623
DNA (606bp) protein (202aa)
Putative methyltransferase small domain protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UY12_9ACTO
MFS transporter
Uncharacterized protein {ECO:0000313|EMBL:AIY16506.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_5158799_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5658..8318
DNA (2661bp) protein (887aa)
Pyruvate phosphate dikinase n=1 Tax=Nocardioides sp. CF8 RepID=R7XYS4_9ACTO
Pyruvate phosphate dikinase {ECO:0000313|EMBL:EON24443.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
pyruvate phosphate dikinase
H1-16-all-fractions_k255_5158799_8
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8315..8872)
DNA (558bp) protein (186aa)
Regulatory protein TetR n=1 Tax=Frankia sp. CN3 RepID=G6H939_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:KJR07575.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
TetR family transcriptional regulator
H1-16-all-fractions_k255_5158799_9
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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8965..9291
DNA (327bp) protein (109aa)
Small multidrug resistance protein n=1 Tax=Frankia sp. CN3 RepID=G6H940_9ACTO
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:ADP78858.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
H1-16-all-fractions_k255_5158799_10
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9333..11018
DNA (1686bp) protein (562aa)
ABC transporter-like protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0Y1_9ACTO
ABC transporter
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIY16510.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_5158799_11
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11015..12223
DNA (1209bp) protein (403aa)
Putative transmembrane efflux protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TP77_9MICO
Putative transmembrane efflux protein {ECO:0000313|EMBL:EAP98335.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
major facilitator transporter
H1-16-all-fractions_k255_5158799_12
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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12223..13227
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037304B5
Reductase {ECO:0000313|EMBL:KHL18879.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
NAD dependent epimerase/dehydratase family protein
H1-16-all-fractions_k255_5158799_13
unknown

Not on your lists

comp(13224..13499)
DNA (276bp) protein (92aa)

This feature has no annotations

H1-16-all-fractions_k255_5158799_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13614..14726
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQJ5_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL84080.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5158799_15
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14767..15558
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EP66_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:ETK36472.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
H1-16-all-fractions_k255_5158799_16
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15559..16035)
DNA (477bp) protein (159aa)
Hemolysin-type calcium-binding region n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VS23_9CYAN
Hemolysin-type calcium-binding region
Tax=RBG_16_Actinobacteria_70_17_curated
H1-16-all-fractions_k255_5158799_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16032..16454)
DNA (423bp) protein (141aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
citrate synthase n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000368003A
hypothetical protein
Displaying 17 items

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