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H1-16-all-fractions_k255_5238587

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_5238587_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1539)
DNA (1539bp) protein (513aa)
Probable primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Primosomal protein N' (Replication factor Y) (Superfamily II helicase) n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJG0_NOCSJ
primosomal protein N'
H1-16-all-fractions_k255_5238587_2
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1578..4238)
DNA (2661bp) protein (887aa)
Zinc metalloproteinase (Hemolysin) n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UQ53_9ACTO
Zinc metalloproteinase (Hemolysin) {ECO:0000313|EMBL:EGD44760.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
putative thermolysin family peptidase
H1-16-all-fractions_k255_5238587_3
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4521..5717)
DNA (1197bp) protein (399aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S-adenosylmethionine synthase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=METK_NOCSJ
H1-16-all-fractions_k255_5238587_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5861..7105)
DNA (1245bp) protein (415aa)
Bifunctional phosphopantothenoylcysteine n=1 Tax=Nocardioides sp. CF8 RepID=R7XWD6_9ACTO
Bifunctional phosphopantothenoylcysteine {ECO:0000313|EMBL:EON23633.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
phosphopantothenoylcysteine decarboxylase
H1-16-all-fractions_k255_5238587_5
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7110..7409)
DNA (300bp) protein (100aa)
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000255|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Kribbella catacumbae RepID=UPI0003629AFB
DNA-directed RNA polymerase subunit omega
H1-16-all-fractions_k255_5238587_6
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7458..8006)
DNA (549bp) protein (183aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
Guanylate kinase n=1 Tax=Nocardioides sp. CF8 RepID=R7XXA7_9ACTO
guanylate kinase
H1-16-all-fractions_k255_5238587_7
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8003..8320)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJF5_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL81940.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5238587_8
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8454..8894)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036CF041
Uncharacterized protein {ECO:0000313|EMBL:KJR08935.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
hypothetical protein
H1-16-all-fractions_k255_5238587_9
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8891..9730)
DNA (840bp) protein (280aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000362F69D
H1-16-all-fractions_k255_5238587_10
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9727..10773)
DNA (1047bp) protein (349aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
dihydroorotate oxidase A (EC:1.3.3.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Nocardioides sp. CF8 RepID=R7XWF4_9ACTO
H1-16-all-fractions_k255_5238587_11
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10770..14084)
DNA (3315bp) protein (1105aa)
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210, ECO:0000313|EMBL:AIY17694.1}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210, ECO:0000313|EMBL:AIY17694.1};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UR41_9ACTO
H1-16-all-fractions_k255_5238587_12
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14084..15208)
DNA (1125bp) protein (375aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Nocardioides sp. CF8 RepID=R7XWE7_9ACTO
carbamoyl phosphate synthase small subunit
H1-16-all-fractions_k255_5238587_13
unknown

Not on your lists

comp(15201..15686)
DNA (486bp) protein (162aa)

This feature has no annotations

H1-16-all-fractions_k255_5238587_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15688..16437)
DNA (750bp) protein (250aa)
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00088289};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Dihydroorotase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJE9_NOCSJ
Displaying 14 items

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