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H1-16-all-fractions_k255_5512410

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_5512410_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85..2157)
DNA (2073bp) protein (691aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKG2_NOCSJ
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABL82297.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5512410_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2250..2867
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKG3_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82298.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5512410_3
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2872..5607)
DNA (2736bp) protein (912aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037B905D
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EGV29106.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
sensory box protein
H1-16-all-fractions_k255_5512410_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5727..6842)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWT0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23817.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
H1-16-all-fractions_k255_5512410_5
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6839..7591)
DNA (753bp) protein (251aa)
Methyltransferase type 11 n=1 Tax=Nocardioides sp. CF8 RepID=R7XWZ2_9ACTO
methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AIY17338.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_5512410_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7603..8865)
DNA (1263bp) protein (421aa)
Glycosyl transferase, group 1 n=1 Tax=Nocardioides sp. CF8 RepID=R7XWV7_9ACTO
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EON23819.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
group 1 glycosyl transferase
H1-16-all-fractions_k255_5512410_7
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9046..9657
DNA (612bp) protein (204aa)
Transcriptional regulator, TetR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKG7_NOCSJ
transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AIY17336.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_5512410_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9667..10425)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKI0_NOCSJ
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABL82315.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5512410_9
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10422..11336)
DNA (915bp) protein (305aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
Putative short-chain type dehydrogenase/reductase {ECO:0000313|EMBL:AIY17334.1}; EC=1.-.-.- {ECO:0000313|EMBL:AIY17334.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nocardioides sp. CF8 RepID=R7XWT5_9ACTO
H1-16-all-fractions_k255_5512410_10
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11407..11601)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SEJ2_9ACTO
ferredoxin
Putative ferredoxin {ECO:0000313|EMBL:AIY17333.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H1-16-all-fractions_k255_5512410_11
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11603..12079)
DNA (477bp) protein (159aa)
PPOX class probable F420-dependent enzyme n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UWC0_9ACTO
PPOX class probable F420-dependent enzyme {ECO:0000313|EMBL:EGD42579.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
pyridoxamine 5'-phosphate oxidase
H1-16-all-fractions_k255_5512410_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12079..13056)
DNA (978bp) protein (326aa)
Ferredoxin--NADP reductase {ECO:0000255|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000255|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000255|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000255|HAMAP-Rule:MF_01685};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Ferredoxin--NADP reductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=FENR_NOCSJ
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
H1-16-all-fractions_k255_5512410_13
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13112..13894)
DNA (783bp) protein (261aa)
FtsQ n=1 Tax=Nocardioides sp. CF8 RepID=R7XXW7_9ACTO
FtsQ {ECO:0000313|EMBL:EON23825.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
H1-16-all-fractions_k255_5512410_14
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13891..14478)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000363EA61
Uncharacterized protein {ECO:0000313|EMBL:EST34761.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
H1-16-all-fractions_k255_5512410_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14475..15710)
DNA (1236bp) protein (412aa)
Virulence factor Mce family protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKI6_NOCSJ
virulence factor Mce family protein
Virulence factor Mce family protein {ECO:0000313|EMBL:ABL82321.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5512410_16
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15707..17005)
DNA (1299bp) protein (433aa)
Virulence factor mce family protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UWC4_9ACTO
Virulence factor mce family protein {ECO:0000313|EMBL:EGD42583.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
virulence factor Mce family protein
H1-16-all-fractions_k255_5512410_17
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17005..18177)
DNA (1173bp) protein (391aa)
Virulence factor Mce family protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKI8_NOCSJ
virulence factor Mce family protein
Virulence factor Mce family protein {ECO:0000313|EMBL:ABL82323.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5512410_18
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18174..19169)
DNA (996bp) protein (332aa)
Virulence factor Mce family protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XXS7_9ACTO
Virulence factor Mce family protein {ECO:0000313|EMBL:EON23775.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
virulence factor Mce family protein
H1-16-all-fractions_k255_5512410_19
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19169..20266)
DNA (1098bp) protein (366aa)
Virulence factor Mce family protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKJ0_NOCSJ
virulence factor Mce family protein
Virulence factor Mce family protein {ECO:0000313|EMBL:ABL82325.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5512410_20
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20274..21395)
DNA (1122bp) protein (374aa)
Virulence factor Mce family protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKJ1_NOCSJ
virulence factor Mce family protein
Virulence factor Mce family protein {ECO:0000313|EMBL:ABL82326.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5512410_21
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21402..22241)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWV3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23778.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
H1-16-all-fractions_k255_5512410_22
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22246..22968)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKJ3_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82328.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H1-16-all-fractions_k255_5512410_23
unknown

Not on your lists

comp(23151..23675)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000366E3CB
H1-16-all-fractions_k255_5512410_24
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23714..24835)
DNA (1122bp) protein (374aa)
UvrABC system protein B n=1 Tax=Nocardioides sp. CF8 RepID=R7XWX3_9ACTO
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
excinuclease ABC subunit B
Displaying 24 items

View Taxonomy