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H1-18-all-fractions_k255_3635337

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_3635337_1
unknown

Not on your lists

comp(3..95)
DNA (93bp) protein (31aa)

This feature has no annotations

H1-18-all-fractions_k255_3635337_2
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(119..541)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000380FA5B
Uncharacterized protein {ECO:0000313|EMBL:CEL19269.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
H1-18-all-fractions_k255_3635337_3
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

803..1891
DNA (1089bp) protein (363aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
Two-component system sensor kinase n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8ETM6_STRRM
two-component system sensor kinase
H1-18-all-fractions_k255_3635337_4
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2030..2494)
DNA (465bp) protein (155aa)
GCN5-related N-acetyltransferase n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PUW7_STANL
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADD44991.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
H1-18-all-fractions_k255_3635337_5
Actinoplanes teichomyceticus, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2506..3138)
DNA (633bp) protein (211aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=1867 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes teichomyceticus.;"
Dipeptidase n=2 Tax=Bacteria RepID=Q6ZZK1_ACTTI
peptidase M15D vanX D-ala-D-ala dipeptidase
H1-18-all-fractions_k255_3635337_6
Streptomyces sp. WAC1438, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3135..4175)
DNA (1041bp) protein (347aa)
vanB; D-alanine--D-lactate ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1214076 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WAC1438.;"
D-alanine--D-alanine ligase n=1 Tax=Streptomyces sp. WAC1438 RepID=S4T2J1_9ACTO
H1-18-all-fractions_k255_3635337_7
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4168..5151)
DNA (984bp) protein (328aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L666_FRASN
D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:ABW16459.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
H1-18-all-fractions_k255_3635337_8
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5456..6577)
DNA (1122bp) protein (374aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
arabinogalactan endo-1,4-beta-galactosidase n=1 Tax=Amycolatopsis balhimycina RepID=UPI000364CF67
arabinogalactan endo-1,4-beta-galactosidase
H1-18-all-fractions_k255_3635337_9
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6616..7956)
DNA (1341bp) protein (447aa)
Extracellular solute-binding protein family 1 n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS88_KRIFD
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJR12727.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
extracellular solute-binding protein family 1 protein
H1-18-all-fractions_k255_3635337_10
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7982..8842)
DNA (861bp) protein (287aa)
ABC transporter permease n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000371C9B3
multiple sugar transport system permease protein
Multiple sugar transport system permease protein {ECO:0000313|EMBL:AGM06845.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
H1-18-all-fractions_k255_3635337_11
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8842..9750)
DNA (909bp) protein (303aa)
Multiple sugar transport system permease protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4T346_AMYOR
Conserved putative membrane protein
Conserved putative membrane protein {ECO:0000313|EMBL:AIG76388.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
H1-18-all-fractions_k255_3635337_12
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10003..10974)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037A04B0
Putative regulatory protein {ECO:0000313|EMBL:CEL16349.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
regulatory protein ArsR
H1-18-all-fractions_k255_3635337_13
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11171..11656
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L5T3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK45383.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
H1-18-all-fractions_k255_3635337_14
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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11934..12350
DNA (417bp) protein (139aa)
ATP-binding region ATPase domain protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WEM2_ACTMD
ATP-binding region ATPase domain-containing protein
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:ACU37822.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
H1-18-all-fractions_k255_3635337_15
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12433..12831
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00035C18EF
hypothetical protein
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-18-all-fractions_k255_3635337_16
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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12921..13748
DNA (828bp) protein (276aa)
Putative hydrolase n=1 Tax=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) RepID=B1W4M3_STRGG
Esterase/lipase {ECO:0000313|EMBL:EWM18494.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hydrolase
H1-18-all-fractions_k255_3635337_17
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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13745..15064
DNA (1320bp) protein (440aa)
PAS domain S-box n=1 Tax=Frankia sp. QA3 RepID=I9KET0_9ACTO
Two-component system response regulator {ECO:0000313|EMBL:EWM18495.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
H1-18-all-fractions_k255_3635337_18
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15061..15396
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=1 Tax=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) RepID=B1W4M5_STRGG
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
anti-sigma factor antagonist
H1-18-all-fractions_k255_3635337_19
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15479..16150)
DNA (672bp) protein (224aa)
AsnC family transcriptional regulator n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000361AD82
Uncharacterized protein {ECO:0000313|EMBL:KJK57796.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
asnC; Lrp/AsnC family transcriptional regulator
H1-18-all-fractions_k255_3635337_20
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16248..16832)
DNA (585bp) protein (195aa)
Putative transcriptional regulator, TetR family n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LDM5_9ACTO
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:CCH21922.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
TetR-family transcriptional regulator
H1-18-all-fractions_k255_3635337_21
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16956..17876
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LDM6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH21923.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
NAD-dependent epimerase/dehydratase
H1-18-all-fractions_k255_3635337_22
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17941..19149)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000374EDB5
Putative transporter {ECO:0000313|EMBL:EFL21697.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
major facilitator superfamily protein
H1-18-all-fractions_k255_3635337_23
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19196..19957
DNA (762bp) protein (254aa)
Transcriptional regulator, DeoR family n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2NMM7_9ACTO
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AEN13108.1}; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SirexAA-E / ActE).;"
H1-18-all-fractions_k255_3635337_24
unknown

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20093..21007
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00035CD198
Displaying 24 items

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