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H1-18-all-fractions_k255_4715788

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_4715788_1
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..749)
DNA (747bp) protein (249aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626AA7
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AIJ25097.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_4715788_2
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(742..1617)
DNA (876bp) protein (292aa)
sugar ABC transporter permease n=1 Tax=Amycolatopsis methanolica RepID=UPI0003635B35
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:KID31697.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
binding-protein-dependent transporter inner membrane component
H1-18-all-fractions_k255_4715788_3
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1614..2447)
DNA (834bp) protein (278aa)
ABC transporter permease n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626AA4
lacF; carbohydrate ABC transporter membrane protein 1, CUT1 family
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EHR63402.1}; Flags: Precursor;; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
H1-18-all-fractions_k255_4715788_4
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2447..3775)
DNA (1329bp) protein (443aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XRC0_9PSEU
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:KID31699.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
family 1 extracellular solute-binding protein
H1-18-all-fractions_k255_4715788_5
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3845..5023
DNA (1179bp) protein (393aa)
transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626AA2
transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:AIJ25101.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_4715788_6
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5271..5846
DNA (576bp) protein (192aa)
riboflavin biosynthesis protein RibD n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5E564
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT41810.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
H1-18-all-fractions_k255_4715788_7
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5853..6761
DNA (909bp) protein (303aa)
RNA polymerase sigma70 factor n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B2EA
RNA polymerase sigma-70 factor family protein
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-18-all-fractions_k255_4715788_8
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6762..7754)
DNA (993bp) protein (331aa)
malate dehydrogenase (EC:1.1.1.37)
Putative carboxylic acid dehydrogenase n=1 Tax=Amycolatopsis orientalis RepID=Q9XBD3_AMYOR
Putative carboxylic acid dehydrogenase {ECO:0000313|EMBL:CAB45039.1}; TaxID=31958 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis (Nocardia orientalis).;"
H1-18-all-fractions_k255_4715788_9
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7832..9034
DNA (1203bp) protein (401aa)
Cysteine desulfurase n=3 Tax=Amycolatopsis mediterranei RepID=D8HTU9_AMYMU
Cysteine desulfurase {ECO:0000313|EMBL:KDN17356.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
cysteine desulfurase
H1-18-all-fractions_k255_4715788_10
Gordonia bronchialis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9889..10128)
DNA (240bp) protein (80aa)
CsbD family protein n=1 Tax=Rhodococcus sp. DK17 RepID=UPI0002DD1D0A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY21804.1}; TaxID=526226 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC; 10667) (Rhodococcus bronchialis).;"
H1-18-all-fractions_k255_4715788_11
Mycobacterium arupense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10187..10624)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003790728
Uncharacterized protein {ECO:0000313|EMBL:KKB97942.1}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycobacterium arupense.;"
hypothetical protein
H1-18-all-fractions_k255_4715788_12
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11806..12168)
DNA (363bp) protein (121aa)
XRE family transcriptional regulator n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003722B11
Uncharacterized protein {ECO:0000313|EMBL:CEL15213.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
XRE family transcriptional regulator
Displaying 12 items

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