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H1-18-all-fractions_k255_135794_3

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(1840..3042)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-subfamily sigma factor n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82NU6_STRAW similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 386.0
  • Bit_score: 547
  • Evalue 1.10e-152
sig16; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 386.0
  • Bit_score: 547
  • Evalue 3.20e-153
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:BAC68905.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 386.0
  • Bit_score: 547
  • Evalue 1.60e-152

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Taxonomy

Streptomyces avermitilis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGAGCGGAGCCTGCGGAGCGAGTCGAGGGCGCGTGAGCATCGACGAGATCTACCGGGCCGAGTACGGGCGGGCGGTGTCCGTGCTGGTCCGGGCGGTGGGCGACATCGGGTTGGCCGAGGAGTGCGTGCAGGACGCGTTCGTCGAGGCGGTACGCCGCTGGCCGGTCGACGGTTTACCGGCCAGCCCCGCCGGTTGGCTGATCACGACCGCGCGCAACCGGGCCATCGATCGGCTGCGGCGCGAGGCCAGCCGGGACGAGCGGCACCGGCAGGCCCTCGACCTGCTGTCGGCCGACGAACCGGCGGAGGAGGGTCCGGTGCGTGACGACCGCATGAGGCTGATCTTCACCTGCTGCCACCCGGCACTCGCGCTCGGCGTGCGGGTCGCGCTGACGTTGCGGCTGATCGGTGGTCTGAGCACGGCCGAGGTCGCCCGCGCGTTCCTGGTGCCCGAGCCGACCATGGCCCAGCGCCTGGTGCGGGCGAAGAACAAGATCCGCGACGCGGGCATCCCGTACCGCGTGCCGCACGAGGCCGACCTGCCGGAGCGGGTGCGTGGTGTCCTGGCGGTGGTGTACCTGATCTTCAACGAGGGCCACCTGGACCGGCCGGAACTGTCCGCGGAGGCCGTCCGGCTCGGCCGGGTGCTGGCCGCCCTGATGCCCGACGAGCCGGAGGTGCTGGGCCTGCTGGCCCTCATGCTGTTGAGCGAGTCCCGCCGCCCCGCCCGCACGAGCCCCTACGGCGAACTGGTCCTGCTGTCCGACCAGGACCGGTCGCGCTGGGACCACGCGCTGGTCGAGGAGGGCCAGGACCTGGTCCGCCGGTGCCTGCGCCGCAACCAGCCGGGCCCCTACCAGCTCCAGGCCGCGATCAACGCCGTGCACAGCGACGCCGCGTCCACCGGTGAGACCGACTGGGCGCAGATCCTCGCCCTGTACGACCAGCTGATGGCCCTCGCCCCGACCCCGGTGGTGGCGCTGAACCGTGCGGTCGCGGTCGGCGAGGTCGCCGGCCCGGCCGAGGCGTTGGCGCTGGTGGACGCGCTCGAGCTGGGCCGCTACCACCTGTACCACTCCGTCCGCGGTCACCTGCTCACCCGCCTGGGCCGGACCGAGGAGGCGGCGGCGGCCTACGGGAACGCGCTGGCCACGGCCACGAGCGAGGCGGAACGCACCCTGCTGCGCCGGCTGCTGGGCTGA
PROTEIN sequence
Length: 401
MSGACGASRGRVSIDEIYRAEYGRAVSVLVRAVGDIGLAEECVQDAFVEAVRRWPVDGLPASPAGWLITTARNRAIDRLRREASRDERHRQALDLLSADEPAEEGPVRDDRMRLIFTCCHPALALGVRVALTLRLIGGLSTAEVARAFLVPEPTMAQRLVRAKNKIRDAGIPYRVPHEADLPERVRGVLAVVYLIFNEGHLDRPELSAEAVRLGRVLAALMPDEPEVLGLLALMLLSESRRPARTSPYGELVLLSDQDRSRWDHALVEEGQDLVRRCLRRNQPGPYQLQAAINAVHSDAASTGETDWAQILALYDQLMALAPTPVVALNRAVAVGEVAGPAEALALVDALELGRYHLYHSVRGHLLTRLGRTEEAAAAYGNALATATSEAERTLLRRLLG*