ggKbase home page

H1-18-all-fractions_k255_135794

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_135794_1
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..539)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WAQ1_ACTMD
Uncharacterized protein {ECO:0000313|EMBL:KID31481.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
hypothetical protein
H1-18-all-fractions_k255_135794_2
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

639..1823
DNA (1185bp) protein (395aa)
Integrase family protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WAQ0_ACTMD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACU37369.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
H1-18-all-fractions_k255_135794_3
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1840..3042)
DNA (1203bp) protein (401aa)
Putative RNA polymerase ECF-subfamily sigma factor n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82NU6_STRAW
sig16; ECF subfamily RNA polymerase sigma factor
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:BAC68905.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
H1-18-all-fractions_k255_135794_4
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3072..3404)
DNA (333bp) protein (111aa)
membrane protein n=1 Tax=Kribbella catacumbae RepID=UPI00037C6E05
Uncharacterized protein {ECO:0000313|EMBL:CEL18451.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
H1-18-all-fractions_k255_135794_5
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3401..3739)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003653DF4
Uncharacterized protein {ECO:0000313|EMBL:EOD66371.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein
H1-18-all-fractions_k255_135794_6
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3826..4722)
DNA (897bp) protein (299aa)
Hydroxyacid dehydrogenase n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6KSI2_STRNV
Hydroxyacid dehydrogenase {ECO:0000313|EMBL:EST31924.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
H1-18-all-fractions_k255_135794_7
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4719..6041)
DNA (1323bp) protein (441aa)
mandelate racemase/muconate lactonizing enzyme (EC:4.2.1.40)
Mandelate racemase/muconate lactonizing enzyme {ECO:0000313|EMBL:CAL99691.1}; EC=4.2.1.40 {ECO:0000313|EMBL:CAL99691.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037F31F3
H1-18-all-fractions_k255_135794_8
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6038..7621)
DNA (1584bp) protein (528aa)
Putative aldehyde dehydrogenase n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YTZ0_NOCFA
aldehyde dehydrogenase
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:BAD58351.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
H1-18-all-fractions_k255_135794_9
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7618..8532)
DNA (915bp) protein (305aa)
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
dapA; 5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6KIQ3_STRNV
H1-18-all-fractions_k255_135794_10
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8629..9519
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036E164C
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:EQD87248.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
H1-18-all-fractions_k255_135794_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9509..10411)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W8I9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44295.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
H1-18-all-fractions_k255_135794_12
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10399..11730)
DNA (1332bp) protein (444aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XH87_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHR60572.1}; Flags: Precursor;; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
hypothetical protein
H1-18-all-fractions_k255_135794_13
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11723..11989)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XH88_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHR60573.1}; Flags: Precursor;; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
hypothetical protein
Displaying 13 items

View Taxonomy