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H1-18-all-fractions_k255_6405262_14

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 5312..5716

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037D62C1 similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 134.0
  • Bit_score: 211
  • Evalue 2.80e-52
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 134.0
  • Bit_score: 214
  • Evalue 8.00e-53
rplR; 50S ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 134.0
  • Bit_score: 207
  • Evalue 1.50e-51

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Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGAGCGAAGCGACTGTTACCAAGCGGCGCAAGCCGCTGGGCAAGGACATCTCGACGCGTCGCCGGGTCGCCAAGGCCCGTCGGCACTTCCGGGTGCGCCGCAAGGTCCAGGGCACCGCAGAGCGTCCGCGCCTGTCGATCACCCGGTCCTCGCGGCACATCGTGGCCCAGCTGGTCGACGACCTGAACGGGCACACGCTGGCGTCGGCCACGAGCCTCGAGGCGGACGTCCGGGCGCTGGACGGCGACAAGAAGGCCCGCGCGGCCAAGGTCGGCCAACTGGTGGCGGACCGCGCCAGGAGCGCCGGCGTCACCAAGGTCGTGTTCGACCACGGTGGCAACGGCTACCACGGCCGCATCGCGGCGCTCGCCGACGCGGCTCGGGAAGCCGGGCTGGAGTTCTAG
PROTEIN sequence
Length: 135
MSEATVTKRRKPLGKDISTRRRVAKARRHFRVRRKVQGTAERPRLSITRSSRHIVAQLVDDLNGHTLASATSLEADVRALDGDKKARAAKVGQLVADRARSAGVTKVVFDHGGNGYHGRIAALADAAREAGLEF*