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H1-18-all-fractions_k255_6405262

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_6405262_1
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1..249
DNA (249bp) protein (83aa)
50S ribosomal protein L2 n=1 Tax=Actinokineospora enzanensis RepID=UPI00037FE8BF
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
rplB; 50S ribosomal protein L2
H1-18-all-fractions_k255_6405262_2
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


269..550
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Actinokineospora enzanensis RepID=UPI000362AA22
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
rpsS; 30S ribosomal protein S19
H1-18-all-fractions_k255_6405262_3
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


570..998
DNA (429bp) protein (143aa)
50S ribosomal protein L22 n=1 Tax=Actinoalloteichus spitiensis RepID=UPI00036861FF
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
rplV; 50S ribosomal protein L22
H1-18-all-fractions_k255_6405262_4
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


998..1834
DNA (837bp) protein (279aa)
30S ribosomal protein S3 n=1 Tax=Actinokineospora enzanensis RepID=UPI000360C2F6
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_6405262_5
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1838..2257
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Actinokineospora enzanensis RepID=UPI00037CB817
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
H1-18-all-fractions_k255_6405262_6
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2257..2505
DNA (249bp) protein (83aa)
50S ribosomal protein L29 n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KF70_SACES
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
H1-18-all-fractions_k255_6405262_7
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2502..2807
DNA (306bp) protein (102aa)
30S ribosomal protein S17 n=1 Tax=Actinokineospora enzanensis RepID=UPI00036A0110
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
30S ribosomal protein S17
H1-18-all-fractions_k255_6405262_8
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2804..3172
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WM17_ACTMD
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
H1-18-all-fractions_k255_6405262_9
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3174..3509
DNA (336bp) protein (112aa)
50S ribosomal protein L24 n=1 Tax=Actinokineospora enzanensis RepID=UPI00037487A7
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Hypothetical protein
H1-18-all-fractions_k255_6405262_10
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3509..4072
DNA (564bp) protein (188aa)
50S ribosomal protein L5 n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WM15_ACTMD
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
H1-18-all-fractions_k255_6405262_11
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4077..4262
DNA (186bp) protein (62aa)
30S ribosomal protein S14 n=1 Tax=Sciscionella marina RepID=UPI0003692959
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
H1-18-all-fractions_k255_6405262_12
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4354..4752
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Actinokineospora enzanensis RepID=UPI00035DE944
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
30S ribosomal protein S8
H1-18-all-fractions_k255_6405262_13
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4773..5309
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Actinokineospora enzanensis RepID=UPI00036F5E5A
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
H1-18-all-fractions_k255_6405262_14
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5312..5716
DNA (405bp) protein (135aa)
50S ribosomal protein L18 n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037D62C1
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
rplR; 50S ribosomal protein L18
H1-18-all-fractions_k255_6405262_15
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5748..6404
DNA (657bp) protein (219aa)
30S ribosomal protein S5 n=1 Tax=Streptomyces sp. AA4 RepID=D9V3J5_9ACTO
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
rpsE; small subunit ribosomal protein S5
H1-18-all-fractions_k255_6405262_16
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6406..6591
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Actinokineospora enzanensis RepID=UPI00037CC0F3
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
rpmD; 50S ribosomal protein L30
H1-18-all-fractions_k255_6405262_17
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6591..7034
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=1 Tax=Amycolatopsis alba RepID=UPI00037C10D6
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000313|EMBL:AEK39203.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_6405262_18
Yarrowia lipolytica, Yarrowia, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

7181..8389
DNA (1209bp) protein (403aa)
PREDICTED: uncharacterized protein LOC100208015 n=1 Tax=unknown RepID=UPI0002B4A5BA
YALI0D26191p {ECO:0000313|EMBL:CAG81510.1}; TaxID=284591 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia.;" source="Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida; lipolytica).;"
hypothetical protein
H1-18-all-fractions_k255_6405262_19
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8689..9990
DNA (1302bp) protein (434aa)
preprotein translocase subunit SecY n=1 Tax=Actinokineospora enzanensis RepID=UPI00036E9564
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
secY; preprotein translocase SecY subunit
H1-18-all-fractions_k255_6405262_20
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9987..10541
DNA (555bp) protein (185aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037BC9CA
adk; adenylate kinase
H1-18-all-fractions_k255_6405262_21
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10538..11353
DNA (816bp) protein (272aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
methionine aminopeptidase n=1 Tax=Actinokineospora enzanensis RepID=UPI000360E2D6
hypothetical protein
H1-18-all-fractions_k255_6405262_22
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11731..11952
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=5 Tax=Pseudonocardiaceae RepID=K0K4G2_SACES
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000313|EMBL:AJK52007.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
H1-18-all-fractions_k255_6405262_23
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11977..12090
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=3 Tax=Pseudonocardiaceae RepID=C6WM00_ACTMD
hypothetical protein
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-18-all-fractions_k255_6405262_24
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12228..12608
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Saccharomonospora glauca K62 RepID=I1CXL2_9PSEU
30S ribosomal protein S13P
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
H1-18-all-fractions_k255_6405262_25
unknown

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12605..12808
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003724FDD
H1-18-all-fractions_k255_6405262_26
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12827..13234
DNA (408bp) protein (136aa)
30S ribosomal protein S11 n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KC86_SACES
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
rpsK; 30S ribosomal protein S11
H1-18-all-fractions_k255_6405262_27
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13256..13861
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Actinokineospora enzanensis RepID=UPI00036F8383
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
rpsD; 30S ribosomal protein S4
H1-18-all-fractions_k255_6405262_28
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13956..14525
DNA (570bp) protein (190aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Actinokineospora enzanensis RepID=UPI00036C8A6B
rpoA; DNA-directed RNA polymerase subunit alpha
Displaying 28 items

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