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H1-18-all-fractions_conc_125

wsip-metawrap-drep-bins_Pseudonocardiales_71_0
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Pseudonocardiales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 251-300 of 836 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H1-18-all-fractions_k255_542132
Class: Actinobacteria (100%)
8 14601 bp 70.15 0.40 94.19
H1-18-all-fractions_k255_4110706
Order: Pseudonocardiales (83.33%)
12 14569 bp 69.83 0.32 84.10
H1-18-all-fractions_k255_5118878
Species: Streptomyces sp. (50%)
2 14531 bp 73.78 0.09 99.24
H1-18-all-fractions_k255_6405262
Order: Pseudonocardiales (89.29%)
28 14525 bp 67.90 4.72 91.17
H1-18-all-fractions_k255_6345673 15 14523 bp 66.87 0.18 77.63
H1-18-all-fractions_k255_1876444
Genus: Amycolatopsis (68.75%)
16 14504 bp 70.40 0.13 81.93
H1-18-all-fractions_k255_3833440
Class: Actinobacteria (88.89%)
9 14473 bp 73.00 1.75 99.14
H1-18-all-fractions_k255_5327434
Order: Pseudonocardiales (80%)
15 14426 bp 70.57 0.43 92.56
H1-18-all-fractions_k255_1857295
Class: Actinobacteria (83.33%)
6 14423 bp 66.59 0.21 79.44
H1-18-all-fractions_k255_1099762
Order: Pseudonocardiales (76.47%)
17 14372 bp 71.11 0.46 86.81
H1-18-all-fractions_k255_2903820
Class: Actinobacteria (100%)
13 14267 bp 70.79 0.21 96.43
H1-18-all-fractions_k255_7375515
Order: Pseudonocardiales (50%)
14 14192 bp 73.27 0.49 86.22
H1-18-all-fractions_k255_6789738
Species: Streptomyces davawensis (53.33%)
15 14185 bp 71.06 0.20 98.15
H1-18-all-fractions_k255_2550349
Order: Pseudonocardiales (92.86%)
14 14161 bp 71.19 0.40 93.64
H1-18-all-fractions_k255_2919925
Genus: Streptomyces (50%)
10 14146 bp 67.28 0.30 84.17
H1-18-all-fractions_k255_4291735
Species: Streptomyces flaveolus (50%)
2 14123 bp 72.43 0.15 99.92
H1-18-all-fractions_k255_4367735
Order: Pseudonocardiales (90.91%)
11 14073 bp 71.38 0.15 90.83
H1-18-all-fractions_k255_4833611
Order: Pseudonocardiales (66.67%)
18 14059 bp 69.38 0.31 84.37
H1-18-all-fractions_k255_1857371
Class: Actinobacteria (50%)
8 14049 bp 72.40 0.09 96.46
H1-18-all-fractions_k255_3964401
Class: Actinobacteria (73.33%)
15 14048 bp 69.68 0.11 78.25
H1-18-all-fractions_k255_1345885
Species: Streptomyces sp. AA4 (66.67%)
6 14036 bp 68.08 0.11 98.23
H1-18-all-fractions_k255_4052614
Class: Actinobacteria (93.33%)
15 14035 bp 72.63 0.30 94.18
H1-18-all-fractions_k255_3000083
Class: Actinobacteria (100%)
10 13855 bp 72.66 0.23 97.48
H1-18-all-fractions_k255_7376902
Class: Actinobacteria (54.55%)
11 13844 bp 72.41 0.15 95.26
H1-18-all-fractions_k255_6851501
Genus: Streptomyces (50%)
10 13838 bp 73.75 0.22 99.14
H1-18-all-fractions_k255_1795184
Order: Pseudonocardiales (70.59%)
17 13826 bp 71.88 0.11 93.06
H1-18-all-fractions_k255_913342
Class: Actinobacteria (70.59%)
17 13794 bp 64.46 0.41 62.68
H1-18-all-fractions_k255_6078924
Order: Pseudonocardiales (60%)
10 13622 bp 72.48 0.25 93.69
H1-18-all-fractions_k255_5185546
Class: Actinobacteria (83.33%)
12 13617 bp 69.78 0.18 87.51
H1-18-all-fractions_k255_6754997
Order: Pseudonocardiales (76.92%)
13 13603 bp 71.60 0.46 92.21
H1-18-all-fractions_k255_3059082
Order: Pseudonocardiales (72.73%)
11 13572 bp 73.79 0.33 95.09
H1-18-all-fractions_k255_3035275
Order: Pseudonocardiales (92.31%)
13 13565 bp 71.77 0.17 82.89
H1-18-all-fractions_k255_6820037
Class: Actinobacteria (100%)
14 13536 bp 70.26 0.18 83.75
H1-18-all-fractions_k255_5035667
Genus: Streptomyces (90.91%)
11 13437 bp 71.59 0.33 92.86
H1-18-all-fractions_k255_2760621
Class: Actinobacteria (77.78%)
9 13421 bp 69.01 0.44 82.51
H1-18-all-fractions_k255_7461916
Species: Actinosynnema mirum (50%)
10 13393 bp 70.08 0.44 94.33
H1-18-all-fractions_k255_3943873
Order: Pseudonocardiales (90.91%)
11 13379 bp 69.74 1.01 95.97
H1-18-all-fractions_k255_3408786
Order: Pseudonocardiales (60%)
15 13304 bp 71.72 0.21 88.51
H1-18-all-fractions_k255_4973116
Species: Actinokineospora spheciospongiae (54.55%)
11 13288 bp 71.67 1.64 95.21
H1-18-all-fractions_k255_1217167
Class: Actinobacteria (71.43%)
14 13277 bp 66.17 0.17 65.98
H1-18-all-fractions_k255_785337
Species: Actinokineospora spheciospongiae (53.85%)
13 13250 bp 69.77 0.71 89.43
H1-18-all-fractions_k255_2998011
Order: Pseudonocardiales (53.33%)
15 13227 bp 68.36 1.10 85.03
H1-18-all-fractions_k255_2360973
Class: Actinobacteria (72.73%)
11 13221 bp 70.20 0.19 82.44
H1-18-all-fractions_k255_7788946
Order: Pseudonocardiales (92.31%)
13 13100 bp 71.64 0.23 94.92
H1-18-all-fractions_k255_4075285
Order: Pseudonocardiales (75%)
16 13042 bp 71.95 0.23 90.61
H1-18-all-fractions_k255_5400947
Class: Actinobacteria (100%)
11 13040 bp 71.44 0.17 93.77
H1-18-all-fractions_k255_5113003
Species: Actinokineospora spheciospongiae (50%)
14 13027 bp 68.57 0.40 85.02
H1-18-all-fractions_k255_1388425
Species: Actinokineospora spheciospongiae (60%)
10 13021 bp 70.78 0.13 93.61
H1-18-all-fractions_k255_505611
Species: Actinopolyspora erythraea (50%)
10 12999 bp 69.94 0.33 86.94
H1-18-all-fractions_k255_7810763
Class: Actinobacteria (93.75%)
16 12928 bp 71.02 0.30 96.60
Displaying items 251-300 of 836 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.