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H1-18-all-fractions_k255_146811

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_146811_1
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..206)
DNA (204bp) protein (68aa)
Transposase n=4 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QLB7_9BRAD
Transposase {ECO:0000313|EMBL:EIG60573.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
integrase catalytic region
H1-18-all-fractions_k255_146811_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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755..1510
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036E33EE
Uncharacterized protein {ECO:0000313|EMBL:ETW94750.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
H1-18-all-fractions_k255_146811_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1455..1937
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036E33EE
Uncharacterized protein {ECO:0000313|EMBL:ETX04670.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
H1-18-all-fractions_k255_146811_4
unknown

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2126..2629
DNA (504bp) protein (168aa)

This feature has no annotations

H1-18-all-fractions_k255_146811_5

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comp(3106..4647)
DNA (1542bp) protein (514aa)
Multidrug efflux system protein n=1 Tax=mine drainage metagenome RepID=E6QRU7_9ZZZZ
Multidrug efflux system protein {ECO:0000313|EMBL:CBI09969.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Multidrug resistance protein B
H1-18-all-fractions_k255_146811_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4672..5190
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMX2_AZOBR
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCC98584.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
H1-18-all-fractions_k255_146811_7
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5192..5584)
DNA (393bp) protein (131aa)
Site-specific recombinase, resolvase family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D065_9RHIZ
resolvase
Resolvase domain protein {ECO:0000313|EMBL:ADK85923.1}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 /; 2st14).;"
H1-18-all-fractions_k255_146811_8
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5730..6233)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JA94_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB66440.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
H1-18-all-fractions_k255_146811_9
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6430..7650)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI000379A5F9
ATPase/topoisomerase-primase domain-containing protein
ATPase/topoisomerase-primase domain-containing protein {ECO:0000313|EMBL:AIC25709.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
H1-18-all-fractions_k255_146811_10

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comp(7654..8670)
DNA (1017bp) protein (339aa)
Marine sediment metagenome DNA, contig: S01H1_S11945 {ECO:0000313|EMBL:GAG03770.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
H1-18-all-fractions_k255_146811_11

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comp(8685..9020)
DNA (336bp) protein (112aa)
Marine sediment metagenome DNA, contig: S06H3_L07479 {ECO:0000313|EMBL:GAI12921.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
H1-18-all-fractions_k255_146811_12
unknown

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comp(9575..10168)
DNA (594bp) protein (198aa)

This feature has no annotations

H1-18-all-fractions_k255_146811_13
unknown

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10520..10843
DNA (324bp) protein (108aa)

This feature has no annotations

H1-18-all-fractions_k255_146811_14
unknown

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comp(11466..11723)
DNA (258bp) protein (86aa)

This feature has no annotations

H1-18-all-fractions_k255_146811_15
unknown

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12464..12724
DNA (261bp) protein (87aa)

This feature has no annotations

H1-18-all-fractions_k255_146811_16
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13021..14073
DNA (1053bp) protein (351aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000255|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000255|HAMAP-Rule:MF_00523};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=LPXD_GRABC
H1-18-all-fractions_k255_146811_17
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14540..15562
DNA (1023bp) protein (341aa)
Mobile element protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MQR8_9SPHN
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46712.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
transposase
H1-18-all-fractions_k255_146811_18
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15559..15963
DNA (405bp) protein (135aa)
Mobile element protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MPE2_9SPHN
DnaC protein {ECO:0000313|EMBL:BAQ50038.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
transposase/IS protein
Displaying 18 items

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