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H1-18-all-fractions_k255_2090342

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_2090342_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..463
DNA (462bp) protein (154aa)
nrd; Vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Vitamin B12-dependent ribonucleotide reductase {ECO:0000313|EMBL:CDK98048.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CDK98048.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036C53E3
H1-18-all-fractions_k255_2090342_2
unknown

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549..1025
DNA (477bp) protein (159aa)

This feature has no annotations

H1-18-all-fractions_k255_2090342_3
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1097..1450)
DNA (354bp) protein (118aa)
transcriptional regulator n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003611EED
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
H1-18-all-fractions_k255_2090342_4
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1472..1945)
DNA (474bp) protein (158aa)
Putative antitoxin n=1 Tax=bacterium symbiont of Theonella swinhoei pTSMAC1 RepID=J9ZW06_9BACT
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_51_14_curated
H1-18-all-fractions_k255_2090342_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(1953..2135)
DNA (183bp) protein (61aa)
Putative toxin n=1 Tax=bacterium symbiont of Theonella swinhoei pTSMAC1 RepID=J9ZXD3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
H1-18-all-fractions_k255_2090342_6
unknown

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2604..2906
DNA (303bp) protein (101aa)

This feature has no annotations

H1-18-all-fractions_k255_2090342_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2759..4096)
DNA (1338bp) protein (446aa)
ABC transporter substrate-binding protein, periplasmic component n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T0K3_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48347.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter substrate-binding protein
H1-18-all-fractions_k255_2090342_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4261..5607)
DNA (1347bp) protein (449aa)
ABC transporter substrate-binding protein, periplasmic component n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T0K3_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48347.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter substrate-binding protein
H1-18-all-fractions_k255_2090342_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5853..6569)
DNA (717bp) protein (239aa)
Putative 3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9N4_AZOL4
Oxidoreductase {ECO:0000313|EMBL:KJB97110.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative 3-oxoacyl-(acyl-carrier-protein) reductase
H1-18-all-fractions_k255_2090342_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6587..7531)
DNA (945bp) protein (315aa)
Cation efflux protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JTI2_9PROT
Cation efflux protein {ECO:0000313|EMBL:EKE78788.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Co/Zn/Cd cation transporter
H1-18-all-fractions_k255_2090342_11
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7504..8094)
DNA (591bp) protein (197aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000255|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; Short=PNPOx {ECO:0000255|HAMAP-Rule:MF_01629};; Pyridoxal 5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_01629}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=2 Tax=Magnetospirillum magneticum RepID=PDXH_MAGSA
H1-18-all-fractions_k255_2090342_12
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8126..9481)
DNA (1356bp) protein (452aa)
UPF0761 membrane protein AZOBR_150087 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AN57_AZOBR
UPF0761 membrane protein N825_04530 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative tRNA-processing ribonuclease
H1-18-all-fractions_k255_2090342_13
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9614..10414
DNA (801bp) protein (267aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
fabI; enoyl-[acyl-carrier-protein] reductase (NADH-dependent) (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKW8_9PROT
H1-18-all-fractions_k255_2090342_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10433..11509
DNA (1077bp) protein (359aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JTI6_9PROT
H1-18-all-fractions_k255_2090342_15
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11511..12083
DNA (573bp) protein (191aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ32_PUSST
hypothetical protein
H1-18-all-fractions_k255_2090342_16
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12100..13875
DNA (1776bp) protein (592aa)
Signal peptide peptidase SppA, 67K type (EC:3.4.21.-)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
Signal peptide peptidase SppA, 67K type n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FZE4_STIAD
H1-18-all-fractions_k255_2090342_17
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13881..14600)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003668E94
nucleoside-diphosphate-sugar epimerase
Tax=RBG_16_Actinobacteria_64_13_curated
Displaying 17 items

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