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H1-18-all-fractions_k255_4341567

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_4341567_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1633)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5Y8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EWY37032.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
H1-18-all-fractions_k255_4341567_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1630..2988)
DNA (1359bp) protein (453aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Diaminopimelate decarboxylase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZGY3_AZOL4
lysA; diaminopimelate decarboxylase
H1-18-all-fractions_k255_4341567_3
unknown

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comp(2927..3181)
DNA (255bp) protein (85aa)

This feature has no annotations

H1-18-all-fractions_k255_4341567_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3178..4599)
DNA (1422bp) protein (474aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
argH; argininosuccinate lyase (EC:4.3.2.1)
argininosuccinate lyase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B36F40
H1-18-all-fractions_k255_4341567_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4636..5211
DNA (576bp) protein (192aa)
Thiol:disulfide interchange protein TlpA n=1 Tax=Oceanibaculum indicum P24 RepID=K2JUT5_9PROT
Thiol:disulfide interchange protein {ECO:0000313|EMBL:KJB91762.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
thiol:disulfide interchange protein
H1-18-all-fractions_k255_4341567_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5192..5857)
DNA (666bp) protein (222aa)
putative Uncharacterized hydrolase RBE_1307 (EC:3.1.-.-)
Phospholipase/carboxylesterase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JE60_9PROT
Phospholipase/carboxylesterase {ECO:0000313|EMBL:EKE68894.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
H1-18-all-fractions_k255_4341567_7
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5917..6837
DNA (921bp) protein (307aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamyl-tRNA synthetase GltX {ECO:0000313|EMBL:ACJ01454.1}; EC=6.1.1.17 {ECO:0000313|EMBL:ACJ01454.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Glutamyl-tRNA synthetase GltX n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYT0_RHOCS
H1-18-all-fractions_k255_4341567_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6911..7696)
DNA (786bp) protein (262aa)
Molybdate ABC transporter periplasmic molybdate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IC50_9BRAD
family 1 extracellular solute-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
H1-18-all-fractions_k255_4341567_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8069..8920)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F825_9PROT
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KJB95208.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
H1-18-all-fractions_k255_4341567_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8940..9239)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2MAU7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJB95207.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
conserved protein of unknown function
H1-18-all-fractions_k255_4341567_11
unknown

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9472..9606
DNA (135bp) protein (45aa)

This feature has no annotations

H1-18-all-fractions_k255_4341567_12
unknown

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9622..9837
DNA (216bp) protein (72aa)

This feature has no annotations

H1-18-all-fractions_k255_4341567_13
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9859..10479
DNA (621bp) protein (207aa)
MmgC_2 protein {ECO:0000313|EMBL:KIT18004.1}; EC=1.3.99.- {ECO:0000313|EMBL:KIT18004.1};; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia aquimarina.;"
Acyl-CoA dehydrogenase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VB18_9RHOB
acyl-CoA dehydrogenase domain-containing protein
Displaying 13 items

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