ggKbase home page

H1-18-all-fractions_k255_5705460

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_5705460_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..615
DNA (615bp) protein (205aa)
peptidase M20 n=1 Tax=Dyella japonica RepID=UPI0002FC2733
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AIF47388.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
H1-18-all-fractions_k255_5705460_2
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(608..1345)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036C08A9
Uncharacterized protein {ECO:0000313|EMBL:EWY38959.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
diguanylate cyclase/phosphodiesterase
H1-18-all-fractions_k255_5705460_3
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1591..2484)
DNA (894bp) protein (298aa)
Putative aminoacrylate hydrolase RutD {ECO:0000256|SAAS:SAAS00023219}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00023215};; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
Putative hydrolase or acyltransferase RutD n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9SCF4_9RHOB
alpha/beta hydrolase fold protein
H1-18-all-fractions_k255_5705460_4
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2803..3099
DNA (297bp) protein (99aa)
XRE family transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2T7F5_RHORU
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABC21083.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
H1-18-all-fractions_k255_5705460_5
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3146..3481)
DNA (336bp) protein (112aa)
UPF0391 membrane protein lpp2589 n=6 Tax=Legionella pneumophila RepID=Y2589_LEGPA
hypothetical protein
UPF0391 membrane protein lptwr_02453 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
H1-18-all-fractions_k255_5705460_6
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3627..4679)
DNA (1053bp) protein (351aa)
HtrA2 peptidase (EC:3.4.21.108)
HtrA2 peptidase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9X9C0_9CHRO
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
H1-18-all-fractions_k255_5705460_7
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4732..5220
DNA (489bp) protein (163aa)
Single-stranded DNA-binding protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKW7_TISMK
single-strand DNA binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
H1-18-all-fractions_k255_5705460_8
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5396..5836)
DNA (441bp) protein (147aa)
UPI0003CDDC9A related cluster n=1 Tax=unknown RepID=UPI0003CDDC9A
Aldehyde-activating protein {ECO:0000313|EMBL:ESY59617.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
glutathione-dependent formaldehyde-activating GFA
H1-18-all-fractions_k255_5705460_9
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5938..6732
DNA (795bp) protein (265aa)
Cyclopentanol dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTZ6_9BRAD
Dehydrogenase {ECO:0000313|EMBL:ETR76808.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
dehydrogenase
H1-18-all-fractions_k255_5705460_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6734..6901
DNA (168bp) protein (56aa)
hypothetical protein
Putative uncharacterized protein id=4468223 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
H1-18-all-fractions_k255_5705460_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

7025..8149
DNA (1125bp) protein (375aa)
methionine synthase, vitamin-B12 independent; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=12555673 bin=CNBR_ACIDO species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
methionine synthase, vitamin-B12 independent
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:ABG04548.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Displaying 11 items

View Taxonomy