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H1-18-all-fractions_k255_6107638

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_6107638_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..288)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMV1_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:EWY40378.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
H1-18-all-fractions_k255_6107638_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(281..1705)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU39_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI71918.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
H1-18-all-fractions_k255_6107638_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2435..3088
DNA (654bp) protein (218aa)
glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AG04_COLFT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
H1-18-all-fractions_k255_6107638_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3256..3804
DNA (549bp) protein (183aa)
HpcH/HpaI aldolase/citrate lyase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7U9_9PROT
HpcH/HpaI aldolase/citrate lyase family protein {ECO:0000313|EMBL:EHL96192.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hpcH/HpaI aldolase/citrate lyase family protein
H1-18-all-fractions_k255_6107638_5
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3762..4052
DNA (291bp) protein (97aa)
HpcH/HpaI aldolase/citrate lyase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7U9_9PROT
HpcH/HpaI aldolase/citrate lyase family protein {ECO:0000313|EMBL:EHL96192.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative aldolase
H1-18-all-fractions_k255_6107638_6
unknown

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4146..4622
DNA (477bp) protein (159aa)

This feature has no annotations

H1-18-all-fractions_k255_6107638_7
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4840..5898
DNA (1059bp) protein (353aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z778_AZOL4
hrcA; Heat-inducible transcription repressor
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
H1-18-all-fractions_k255_6107638_8
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5906..6517
DNA (612bp) protein (204aa)
Protein GrpE n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4D1_AZOL4
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
grpE; Heat Shock Chaperone (HSP-70 cofactor)
H1-18-all-fractions_k255_6107638_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6682..8622
DNA (1941bp) protein (647aa)
Chaperone protein DnaK n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=DNAK_RHOCS
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
dnaK; molecular chaperone DnaK
H1-18-all-fractions_k255_6107638_10
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8722..9852
DNA (1131bp) protein (377aa)
Chaperone protein DnaJ n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6W5_AZOL4
dnaJ; Chaperone protein, heat shock protein (Hsp40)
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
H1-18-all-fractions_k255_6107638_11
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9876..12656)
DNA (2781bp) protein (927aa)
protein-PII uridylyltransferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGE4_AZOBR
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
H1-18-all-fractions_k255_6107638_12
bacterium YEK0313, Bacteria

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comp(12685..13443)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GBX0_9CAUL
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:CEJ15852.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short-chain dehydrogenase/reductase SDR
H1-18-all-fractions_k255_6107638_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(13491..14336)
DNA (846bp) protein (282aa)
Alpha/beta hydrolase fold protein id=2883278 bin=GWA2_Methylomirabilis_73_35 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase fold protein
Tax=GWA2_Rokubacteria_73_35_curated
H1-18-all-fractions_k255_6107638_14
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14474..14689
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:EWY39493.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
H1-18-all-fractions_k255_6107638_15

Not on your lists

14871..15290
DNA (420bp) protein (140aa)
Putative molecular chaperone n=1 Tax=uncultured bacterium CSL142 RepID=G4WVN5_9BACT
Putative molecular chaperone {ECO:0000313|EMBL:AEQ20487.1}; TaxID=1091569 species="Bacteria; environmental samples.;" source="uncultured bacterium CSL142.;"
heat-shock protein Hsp20
H1-18-all-fractions_k255_6107638_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15310..17745
DNA (2436bp) protein (812aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Lon protease n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APV8_AZOBR
DNA-binding protein
H1-18-all-fractions_k255_6107638_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17919..19004
DNA (1086bp) protein (362aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY0_9SPHN
putative hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
H1-18-all-fractions_k255_6107638_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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19001..20113
DNA (1113bp) protein (371aa)
Amidohydrolase 2 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A143_STAND
amidohydrolase 2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
H1-18-all-fractions_k255_6107638_19
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20126..20437
DNA (312bp) protein (104aa)
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
H1-18-all-fractions_k255_6107638_20
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20453..21949
DNA (1497bp) protein (499aa)
Metal-dependent hydrolase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HNA1_9BRAD
Metal-dependent hydrolase {ECO:0000313|EMBL:ERF86288.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
amidohydrolase 2
H1-18-all-fractions_k255_6107638_21
unknown

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22200..22442
DNA (243bp) protein (81aa)

This feature has no annotations

H1-18-all-fractions_k255_6107638_22
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22439..23191)
DNA (753bp) protein (251aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Porphobilinogen deaminase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZBS8_METPB
porphobilinogen deaminase
Displaying 22 items

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