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H1-18-all-fractions_k255_451271

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_451271_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..319
DNA (318bp) protein (106aa)
aldolase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035FAD93
Class II aldolase/adducin-like protein {ECO:0000313|EMBL:EHN67603.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
aldolase
H1-18-all-fractions_k255_451271_2
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

455..787
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CZH4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIJ49017.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
XRE family transcriptional regulator
H1-18-all-fractions_k255_451271_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

771..1424
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035D522B
Uncharacterized protein {ECO:0000313|EMBL:KIZ35612.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
H1-18-all-fractions_k255_451271_4
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1463..1714)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QPA5_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW92860.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
H1-18-all-fractions_k255_451271_5
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2286..2756
DNA (471bp) protein (157aa)
Oxidoreductase iron sulfur binding subunit n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WWM6_PSEDE
oxidoreductase iron sulfur binding subunit
Oxidoreductase iron sulfur binding subunit {ECO:0000313|EMBL:CDF84249.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
H1-18-all-fractions_k255_451271_6
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2758..4929
DNA (2172bp) protein (724aa)
iorB; isoquinoline 1-oxidoreductase subunit beta (EC:1.3.99.16)
Isoquinoline 1-oxidoreductase subunit beta {ECO:0000313|EMBL:AJK48460.1}; EC=1.3.99.16 {ECO:0000313|EMBL:AJK48460.1};; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XDJ1_METSD
H1-18-all-fractions_k255_451271_7
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5552..6541)
DNA (990bp) protein (330aa)
octaprenyl diphosphate synthase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003810E45
Uncharacterized protein {ECO:0000313|EMBL:EKU81607.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
ispB; octaprenyl-diphosphate synthase
H1-18-all-fractions_k255_451271_8
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6795..7106
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Janthinobacterium lividum RepID=UPI000287BE37
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
50S ribosomal protein L21
H1-18-all-fractions_k255_451271_9
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7148..7423
DNA (276bp) protein (92aa)
50S ribosomal protein L27 n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DA62_9BURK
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
rpmA; ribosomal protein L27
H1-18-all-fractions_k255_451271_10
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7541..8656
DNA (1116bp) protein (372aa)
GTPase CgtA n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000368488D
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
GTP-binding protein Obg/CgtA
H1-18-all-fractions_k255_451271_11
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8658..9062
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DEB0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU81611.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
putative membrane protein
H1-18-all-fractions_k255_451271_12
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9073..10191
DNA (1119bp) protein (373aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
proB; glutamate 5-kinase (EC:2.7.2.11)
gamma-glutamyl kinase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000346C301
H1-18-all-fractions_k255_451271_13
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10251..10898)
DNA (648bp) protein (216aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
nth; endonuclease III (EC:4.2.99.18)
endonuclease IV n=1 Tax=Massilia niastensis RepID=UPI000375F425
H1-18-all-fractions_k255_451271_14
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10895..11566)
DNA (672bp) protein (224aa)
Electron transport complex, rnfabcdge type, B subunit n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DEB5_9BURK
Ferredoxin {ECO:0000313|EMBL:KFI07248.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
rnfB; electron transport complex protein RnfB
H1-18-all-fractions_k255_451271_15

Not on your lists

comp(11726..12961)
DNA (1236bp) protein (412aa)
phaZ; polyhydroxyalkanoate depolymerase, intracellular family protein (EC:3.1.1.-)
Poly[D(--3-Hydroxybutyrate] depolymerase) n=1 Tax=uncultured bacterium BLR10 RepID=C0INR5_9BACT
Poly[D(--3-Hydroxybutyrate] depolymerase) {ECO:0000313|EMBL:ACN58951.1}; TaxID=506513 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR10.;"
H1-18-all-fractions_k255_451271_16
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13229..14320)
DNA (1092bp) protein (364aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
ferredoxin--NADP reductase n=1 Tax=Massilia niastensis RepID=UPI000379DE11
pyridine nucleotide-disulphide oxidoreductase family protein
H1-18-all-fractions_k255_451271_17
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14393..14716)
DNA (324bp) protein (108aa)
ferredoxin n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035FDD4C
Ferredoxin protein {ECO:0000313|EMBL:KFC69817.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
fdxA; ferredoxin-1
H1-18-all-fractions_k255_451271_18
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15019..16476)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036669BA
Uncharacterized protein {ECO:0000313|EMBL:KFC69815.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H1-18-all-fractions_k255_451271_19

Not on your lists

16602..17801
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BLR10 RepID=C0INR8_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACN58954.1}; TaxID=506513 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR10.;"
Na+/H+ antiporter NhaD-like permease
H1-18-all-fractions_k255_451271_20
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17848..18126
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI0002889979
Polyhydroxyalkanoic acid system protein {ECO:0000313|EMBL:KHA78789.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
polyhydroxyalkanoic acid system family protein
H1-18-all-fractions_k255_451271_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18190..18447)
DNA (258bp) protein (86aa)
putative acyl-CoA-binding protein (ACBP) (EC:5.3.3.8)
acyl-CoA-binding protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003604641
Acyl-CoA-binding protein {ECO:0000313|EMBL:KGF80857.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_451271_22
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18458..18820)
DNA (363bp) protein (121aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003624FAC
H1-18-all-fractions_k255_451271_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19032..20015
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003774ECE
Uncharacterized protein {ECO:0000313|EMBL:KGF80855.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative uncharacterized protein
H1-18-all-fractions_k255_451271_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20026..20811
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F794F
Peptidase A8 {ECO:0000313|EMBL:KGF80854.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
polysaccharide deacetylase family protein
H1-18-all-fractions_k255_451271_25
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20808..21803
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034904DF
Fatty acid hydroxylase domain-containing protein {ECO:0000313|EMBL:EZP34976.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
fatty acid hydroxylase superfamily protein
H1-18-all-fractions_k255_451271_26
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21803..22639
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034AE53B
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDG84953.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_451271_27
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22977..25817
DNA (2841bp) protein (947aa)
carboxypeptidase (EC:3.4.-.-)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003622B85
Glycosyl transferase family 51 {ECO:0000313|EMBL:KFI07258.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
Displaying 27 items

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