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H1-18-all-fractions_k255_606315

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_606315_1
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..497)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034DC0F3
putative signal transduction protein
Putative signal transduction protein {ECO:0000313|EMBL:ADC62068.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
H1-18-all-fractions_k255_606315_2
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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684..1190
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003765CF3
Chemotaxis protein CheW {ECO:0000313|EMBL:ELX09641.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
cheW-like domain protein
H1-18-all-fractions_k255_606315_3
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1292..3280)
DNA (1989bp) protein (663aa)
glutathione ABC transporter ATP-binding protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003813A00
ABC transport system ATP-binding protein {ECO:0000313|EMBL:ELX09640.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
yheS; uncharacterized ABC transporter ATP-binding protein YheS
H1-18-all-fractions_k255_606315_4
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3301..4185)
DNA (885bp) protein (295aa)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine methyltransferase PrmB {ECO:0000256|HAMAP-Rule:MF_02125}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
prmB; -(glutamine-N5) methyltransferase, ribosomal protein L3-specific (EC:2.1.1.-)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037CCC80
H1-18-all-fractions_k255_606315_5
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4220..5356)
DNA (1137bp) protein (379aa)
dapE; succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
succinyl-diaminopimelate desuccinylase n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037CC650
H1-18-all-fractions_k255_606315_6
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5353..5724)
DNA (372bp) protein (124aa)
Spx/MgsR family transcriptional regulator n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DDK7_9BURK
ArsC family transcriptional regulator {ECO:0000313|EMBL:KFI06573.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
arsC1; ArsC family protein
H1-18-all-fractions_k255_606315_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5836..7035)
DNA (1200bp) protein (400aa)
Tetratricopeptide repeat n=1 Tax=uncultured organism RepID=T1W7R7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGF78347.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
TPR domain-containing protein
H1-18-all-fractions_k255_606315_8
unknown

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comp(7205..7870)
DNA (666bp) protein (222aa)

This feature has no annotations

H1-18-all-fractions_k255_606315_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8032..8565)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000376269F
General stress protein {ECO:0000313|EMBL:KGF83030.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
general stress protein
H1-18-all-fractions_k255_606315_10
unknown

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8752..8943
DNA (192bp) protein (64aa)

This feature has no annotations

H1-18-all-fractions_k255_606315_11
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8957..10105)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036DB3DC
Twitching motility protein PilT {ECO:0000313|EMBL:KFI06570.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
twitching motility family protein
H1-18-all-fractions_k255_606315_12
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10116..10940)
DNA (825bp) protein (275aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035C7C83
H1-18-all-fractions_k255_606315_13
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10951..12318)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035DD27D
Succinyldiaminopimelate transaminase {ECO:0000313|EMBL:EKU82321.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
aminotransferase class I and II family protein
H1-18-all-fractions_k255_606315_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12386..13771)
DNA (1386bp) protein (462aa)
Diguanylate cyclase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PFI4_9BURK
Diguanylate cyclase {ECO:0000313|EMBL:KGF82386.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
sensory box protein
H1-18-all-fractions_k255_606315_15
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13917..15110)
DNA (1194bp) protein (398aa)
2-aminoadipate transaminase LysN {ECO:0000313|EMBL:EZP35432.1}; EC=2.6.1.39 {ECO:0000313|EMBL:EZP35432.1};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
lysN; 2-aminoadipate transaminase (EC:2.6.1.39)
2-aminoadipate aminotransferase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036AD12E
H1-18-all-fractions_k255_606315_16

Not on your lists

comp(15375..15833)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035DE5E6
Endoribonuclease L-PSP {ECO:0000313|EMBL:AIA15423.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
endoribonuclease L-PSP family protein
H1-18-all-fractions_k255_606315_17
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15970..17883
DNA (1914bp) protein (638aa)
Chaperone protein HtpG n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DUH6_9BURK
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
htpG; chaperone protein htpG
H1-18-all-fractions_k255_606315_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18012..18569)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035E708A
Alpha/beta hydrolase {ECO:0000313|EMBL:KGF82371.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H1-18-all-fractions_k255_606315_19
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18781..19620)
DNA (840bp) protein (280aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
kynA; tryptophan 2,3-dioxygenase (EC:1.13.11.11)
tryptophan 2,3-dioxygenase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003807A48
H1-18-all-fractions_k255_606315_20
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19641..20888)
DNA (1248bp) protein (416aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
kynU; kynureninase (EC:3.7.1.3)
kynureninase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000365E6F7
H1-18-all-fractions_k255_606315_21
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21415..21732
DNA (318bp) protein (106aa)
flagellar transcriptional regulator FlhD n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000362C07E
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
flagellar transcriptional activator family protein
H1-18-all-fractions_k255_606315_22
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21784..22344
DNA (561bp) protein (187aa)
transcriptional regulator n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003611522
Flagellar transcriptional regulator FlhC {ECO:0000256|HAMAP-Rule:MF_01891, ECO:0000256|PIRNR:PIRNR003159}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
flhC; flagellar transcriptional regulator FlhC
Displaying 22 items

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