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H1-18-all-fractions_k255_929974

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_929974_1
unknown

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comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

H1-18-all-fractions_k255_929974_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(479..1600)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTW1_ACCPU
hypothetical protein
Tax=CG_Rhodof_02
H1-18-all-fractions_k255_929974_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1581..3452)
DNA (1872bp) protein (624aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B8Y8_9PROT
Asparagine synthase {ECO:0000313|EMBL:GAO34889.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
H1-18-all-fractions_k255_929974_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3524..4756)
DNA (1233bp) protein (411aa)
Orn/DAP/Arg decarboxylase 2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5L5_NITMU
Orn/DAP/Arg decarboxylase 2
Orn/DAP/Arg decarboxylase 2 {ECO:0000313|EMBL:ABB75956.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
H1-18-all-fractions_k255_929974_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4753..6339)
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037E2DD8
Acyl--CoA ligase {ECO:0000313|EMBL:KIO48824.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
AMP-dependent synthetase and ligase
H1-18-all-fractions_k255_929974_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6596..7921
DNA (1326bp) protein (442aa)
O-antigen polymerase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCB3_NITMU
Polymerase {ECO:0000313|EMBL:KIO49418.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
O-antigen polymerase
H1-18-all-fractions_k255_929974_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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7918..8937
DNA (1020bp) protein (340aa)
COGs COG0726 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK79_9PROT
COGs COG0726 {ECO:0000313|EMBL:CCU63871.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
polysaccharide deacetylase
H1-18-all-fractions_k255_929974_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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9012..9263
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCD8_NITMU
Acyl carrier protein {ECO:0000313|EMBL:KIO49429.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
H1-18-all-fractions_k255_929974_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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9260..10135
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037A2F1C
Esterase {ECO:0000313|EMBL:KIO49430.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
esterase/lipase/thioesterase family protein
H1-18-all-fractions_k255_929974_10
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10132..10983
DNA (852bp) protein (284aa)
Hydrolase-like protein 1, exosortase system type 1 associated n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DZH0_9BURK
Hydrolase-like protein 1, exosortase system type 1 associated {ECO:0000313|EMBL:EKU84027.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
exosortase system type 1 associated
H1-18-all-fractions_k255_929974_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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11046..11669
DNA (624bp) protein (208aa)
InterPro IPR001440 COGs COG0457 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK90_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49480.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
H1-18-all-fractions_k255_929974_12
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11676..13115)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DID5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU84028.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
H1-18-all-fractions_k255_929974_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13126..13872)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037EAA5D
Uncharacterized protein {ECO:0000313|EMBL:KGF79348.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H1-18-all-fractions_k255_929974_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13883..15238)
DNA (1356bp) protein (452aa)
Fis family transcriptional regulator n=1 Tax=Massilia niastensis RepID=UPI0003704F3C
Fis family transcriptional regulator {ECO:0000313|EMBL:KGF82268.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
two component sigma-54 specific Fis family transcriptional regulator
H1-18-all-fractions_k255_929974_15
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15255..16058)
DNA (804bp) protein (268aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003629B58
periplasmic sensor signal transduction histidine kinase
Displaying 15 items

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