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H1-18-all-fractions_k255_1809676

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_1809676_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(298..1245)
DNA (948bp) protein (316aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037A790E
H1-18-all-fractions_k255_1809676_2
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1249..3159)
DNA (1911bp) protein (637aa)
DNA mismatch repair protein MutL n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037B70BF
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
mutL; DNA mismatch repair MutL family protein
H1-18-all-fractions_k255_1809676_3
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3249..4163)
DNA (915bp) protein (305aa)
putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type protein (EC:5.2.1.8)
Putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type protein {ECO:0000313|EMBL:CDG81489.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CDG81489.1};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037B4A1B
H1-18-all-fractions_k255_1809676_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4327..4974
DNA (648bp) protein (216aa)
membrane protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035CE9BD
Membrane protein {ECO:0000313|EMBL:KGF80606.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
dedA; protein dedA
H1-18-all-fractions_k255_1809676_5
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5087..6253
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000363CB3F
eukaryotic-type carbonic anhydrase family protein
Eukaryotic-type carbonic anhydrase family protein {ECO:0000313|EMBL:CDG81491.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_1809676_6
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6254..7057)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035E9C27
Aldose epimerase {ECO:0000313|EMBL:KFI06229.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
aldose 1-epimerase family protein
H1-18-all-fractions_k255_1809676_7
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7086..8468)
DNA (1383bp) protein (461aa)
cell wall hydrolase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000370320D
N-acetylmuramoyl-L-alanine amidase family protein
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:CDG81493.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_1809676_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8513..8998)
DNA (486bp) protein (162aa)
hydrolase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037BEF07
Hydrolase {ECO:0000313|EMBL:KGF80611.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
uncharacterised P-loop hydrolase UPF0079 family protein
H1-18-all-fractions_k255_1809676_9
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9051..10163
DNA (1113bp) protein (371aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
Epoxyqueuosine reductase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003798DA4
iron-sulfur cluster binding protein, putative
H1-18-all-fractions_k255_1809676_10
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10147..10524)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037F155D
Uncharacterized protein {ECO:0000313|EMBL:KFC64219.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H1-18-all-fractions_k255_1809676_11
unknown

Not on your lists

10718..11140
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00036A4EE9
H1-18-all-fractions_k255_1809676_12
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11161..11742)
DNA (582bp) protein (194aa)
LuxR family transcriptional regulator n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036ECBFC
TRAP C4-dicarboxylate transport system response regulator DctR {ECO:0000313|EMBL:ELX10687.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
response regulator
H1-18-all-fractions_k255_1809676_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11783..13747)
DNA (1965bp) protein (655aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034B2823
sensory box protein
H1-18-all-fractions_k255_1809676_14
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13942..14925
DNA (984bp) protein (328aa)
TRAP C4-dicarboxylate transport system periplasmic substrate binding protein DctP n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PG92_9BURK
TRAP C4-dicarboxylate transport system periplasmic substrate binding protein DctP {ECO:0000313|EMBL:ELX10685.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
dctP; C4-dicarboxylate-binding periplasmic protein
H1-18-all-fractions_k255_1809676_15
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15019..15588
DNA (570bp) protein (190aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00038053AE
tripartite ATP-independent periplasmic transporters, DctQ component family protein
Tripartite ATP-independent periplasmic transporters, DctQ component family protein {ECO:0000313|EMBL:CDG81502.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_1809676_16
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15585..16865
DNA (1281bp) protein (427aa)
TRAP C4-dicarboxylate transport system DctM subunit DctM n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PIJ2_9BURK
TRAP C4-dicarboxylate transport system DctM subunit DctM {ECO:0000313|EMBL:ELX10683.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
TRAP transporter, DctM subunit
H1-18-all-fractions_k255_1809676_17
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17180..17722
DNA (543bp) protein (181aa)
methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000379470E
Cysteine methyltransferase {ECO:0000313|EMBL:KFI06221.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
H1-18-all-fractions_k255_1809676_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17713..18696
DNA (984bp) protein (328aa)
tyrosine recombinase XerD n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037F697A
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
xerD; tyrosine recombinase XerD
H1-18-all-fractions_k255_1809676_19
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18817..19023
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003486888
Uncharacterized protein {ECO:0000313|EMBL:KHA79594.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein
H1-18-all-fractions_k255_1809676_20
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19330..22470)
DNA (3141bp) protein (1047aa)
nodulation protein NolG n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036E3C1E
Nodulation protein NolG {ECO:0000313|EMBL:KHA79586.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
acrB/AcrD/AcrF family protein
H1-18-all-fractions_k255_1809676_21
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22474..23724)
DNA (1251bp) protein (417aa)
Efflux transporter, RND family (NolF-like) protein n=1 Tax=Janthinobacterium lividum RepID=UPI000289903C
MFP transporter {ECO:0000313|EMBL:KHA79585.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
efflux transporter, RND family, MFP subunit
H1-18-all-fractions_k255_1809676_22
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24011..26584
DNA (2574bp) protein (858aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003696845
sensory box protein
Sensory box protein {ECO:0000313|EMBL:CDG81520.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_1809676_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26565..27539)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035F5046
Uncharacterized protein {ECO:0000313|EMBL:KGF80619.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
endonuclease/Exonuclease/phosphatase family protein
H1-18-all-fractions_k255_1809676_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27578..28069
DNA (492bp) protein (164aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
membrane protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037F57BC
hypothetical protein
H1-18-all-fractions_k255_1809676_25
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28189..28824
DNA (636bp) protein (212aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DFZ0_9BURK
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
conserved hypothetical protein
H1-18-all-fractions_k255_1809676_26
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28891..29532
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000370822A
DSBA oxidoreductase {ECO:0000313|EMBL:EZP41833.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
DSBA-like thioredoxin domain protein
H1-18-all-fractions_k255_1809676_27
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29715..30554)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000378B13F
Uncharacterized protein {ECO:0000313|EMBL:EKU83160.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
H1-18-all-fractions_k255_1809676_28
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30684..31076)
DNA (393bp) protein (131aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
UGMP family protein n=1 Tax=Janthinobacterium lividum RepID=UPI000288E27F
metalloendopeptidase, , glycoprotease family protein
Displaying 28 items

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