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H1-18-all-fractions_k255_1885856

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_1885856_1
Pseudomonas sp. GM16, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..296
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0003167542
Uncharacterized protein {ECO:0000313|EMBL:EJL97329.1}; TaxID=1144322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM16.;"
hypothetical protein
H1-18-all-fractions_k255_1885856_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(482..2785)
DNA (2304bp) protein (768aa)
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DBW3_9BURK
Clp protease ClpX {ECO:0000313|EMBL:KGF79786.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
H1-18-all-fractions_k255_1885856_3
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2782..3084)
DNA (303bp) protein (101aa)
ATP-dependent Clp protease ClpS n=1 Tax=Massilia niastensis RepID=UPI000378CBC9
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
ATP-dependent Clp protease adaptor ClpS family protein
H1-18-all-fractions_k255_1885856_4
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3407..3610
DNA (204bp) protein (68aa)
Cold-shock protein, CspA family n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PP50_9BURK
Cold-shock protein, CspA family {ECO:0000313|EMBL:ELX13337.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
cspD; cold-shock DNA-binding domain-containing protein
H1-18-all-fractions_k255_1885856_5
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3733..4986)
DNA (1254bp) protein (418aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
Isocitrate dehydrogenase [NADP] (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034CE8B8
H1-18-all-fractions_k255_1885856_6
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5106..5669
DNA (564bp) protein (188aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
pseudouridine synthase n=1 Tax=Massilia niastensis RepID=UPI000361E853
conserved hypothetical protein
H1-18-all-fractions_k255_1885856_7
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5800..8031)
DNA (2232bp) protein (744aa)
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase, NADP-dependent n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DTU2_9BURK
Isocitrate dehydrogenase, NADP-dependent {ECO:0000313|EMBL:EKU80755.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
H1-18-all-fractions_k255_1885856_8
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8213..8479)
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D7W0_9BURK
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
rpsT; 30S ribosomal protein S20
H1-18-all-fractions_k255_1885856_9
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8721..10259
DNA (1539bp) protein (513aa)
membrane protein n=1 Tax=Massilia niastensis RepID=UPI00036943F9
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
mviN; integral membrane protein MviN
H1-18-all-fractions_k255_1885856_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10281..10979)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000382F0E4
Type II secretion system pseudopilin PulG {ECO:0000313|EMBL:KGF79794.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cog2165, type II secretory pathway, pseudopilin protein
H1-18-all-fractions_k255_1885856_11
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10945..11346)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000371A879
Bacterial type II secretion system protein G domain-containing protein {ECO:0000313|EMBL:ELX13327.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
prepilin-type N-terminal cleavage/methylation domain protein
H1-18-all-fractions_k255_1885856_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11351..11821)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000372A610
General secretion pathway protein GspG {ECO:0000313|EMBL:KGF79796.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
prepilin-type N-terminal cleavage/methylation domain protein
H1-18-all-fractions_k255_1885856_13
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11818..13914)
DNA (2097bp) protein (699aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D253D
Gspd-like protein {ECO:0000313|EMBL:KFC63151.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
bacterial type II and III secretion system family protein
H1-18-all-fractions_k255_1885856_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13914..14438)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037F7539
Uncharacterized protein {ECO:0000313|EMBL:KGF79797.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative prolin-rich transmembrane protein
H1-18-all-fractions_k255_1885856_15
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14435..14995)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DPN3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU80742.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
putative uncharacterized domain protein
H1-18-all-fractions_k255_1885856_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14992..15546)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003797B0A
Uncharacterized protein {ECO:0000313|EMBL:KGF79799.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative uncharacterized protein
H1-18-all-fractions_k255_1885856_17
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15543..16376)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000380E9B0
Uncharacterized protein {ECO:0000313|EMBL:ELX13321.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
H1-18-all-fractions_k255_1885856_18
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16369..18081)
DNA (1713bp) protein (571aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003469FA5
type II/IV secretion system family protein
Type II/IV secretion system family protein {ECO:0000313|EMBL:CDG84582.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_1885856_19
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18078..19253)
DNA (1176bp) protein (392aa)
Type II secretion system protein F n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PNY2_9BURK
Type II secretion system protein F {ECO:0000313|EMBL:ELX13319.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
bacterial type II secretion system F domain protein
H1-18-all-fractions_k255_1885856_20
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19269..19451)
DNA (183bp) protein (61aa)
General secretion pathway protein G n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DPM8_9BURK
gspG; general secretion pathway protein G
General secretion pathway protein G {ECO:0000313|EMBL:CDG84584.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
Displaying 20 items

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