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H1-18-all-fractions_k255_2371572

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_2371572_1
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(121..1812)
DNA (1692bp) protein (564aa)
peptide chain release factor 3 n=1 Tax=Janthinobacterium lividum RepID=UPI000287FB8F
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_2371572_2
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1998..3086
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035DD0DA
Uncharacterized protein {ECO:0000313|EMBL:EKU81905.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
prolin-rich signal peptide protein
H1-18-all-fractions_k255_2371572_3
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3156..7832)
DNA (4677bp) protein (1559aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PC15_9BURK
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:CDG83467.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
pilY1; pyrrolo-quinoline quinone
H1-18-all-fractions_k255_2371572_4
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7889..8494)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DTA4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDG83468.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_2371572_5
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8491..9699)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000366AECB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDG83469.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_2371572_6
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9699..10142)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000364CE93
Uncharacterized protein {ECO:0000313|EMBL:ELX09162.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
pilV; type IV pilus modification protein PilV
H1-18-all-fractions_k255_2371572_7
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10139..10783)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00036DD751
prepilin-type N-terminal cleavage/methylation domain protein
Prepilin-type N-terminal cleavage/methylation domain protein {ECO:0000313|EMBL:CDG83471.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_2371572_8
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10771..11205)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003749EAC
prepilin-type N-terminal cleavage/methylation domain protein
Prepilin-type N-terminal cleavage/methylation domain protein {ECO:0000313|EMBL:CDG83472.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_2371572_9
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11317..12375)
DNA (1059bp) protein (353aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000380F076
HAMP domain protein
H1-18-all-fractions_k255_2371572_10
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12372..13043)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000375FA63
DNA-binding response regulator {ECO:0000313|EMBL:ELX09166.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
response regulator
H1-18-all-fractions_k255_2371572_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13419..14228
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DXE6_9BURK
Protein kinase {ECO:0000313|EMBL:KGF83127.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cyclic nucleotide-binding domain protein
H1-18-all-fractions_k255_2371572_12
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14185..15711)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003623A41
Uncharacterized protein {ECO:0000313|EMBL:EKU81894.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
H1-18-all-fractions_k255_2371572_13
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15799..16434)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCG5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU81893.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
response regulator
H1-18-all-fractions_k255_2371572_14
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16599..17015)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00036159C6
Transcriptional regulator, merR family {ECO:0000313|EMBL:ELX09170.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
MerR family transcriptional regulator
H1-18-all-fractions_k255_2371572_15
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17025..17372)
DNA (348bp) protein (116aa)
Integration host factor subunit alpha n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PCT3_9BURK
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
ihfA; integration host factor alpha-subunit
H1-18-all-fractions_k255_2371572_16
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17482..18537)
DNA (1056bp) protein (352aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
pheT; phenylalanyl-tRNA synthetase, beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DXE2_9BURK
Displaying 16 items

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