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H1-18-all-fractions_k255_2741321

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_2741321_1
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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183..1910
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PR63_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX13916.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
H1-18-all-fractions_k255_2741321_2
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1918..3318
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PQI8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX13915.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
Tat pathway signal protein
H1-18-all-fractions_k255_2741321_3
unknown

Not on your lists

3339..3650
DNA (312bp) protein (104aa)

This feature has no annotations

H1-18-all-fractions_k255_2741321_4
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3826..5175)
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI00028A39E3
Uncharacterized protein {ECO:0000313|EMBL:EZP36820.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
putative uncharacterized protein
H1-18-all-fractions_k255_2741321_5
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5284..6756
DNA (1473bp) protein (491aa)
Uncharacterized protein id=4947011 bin=GWC2_Nitrospirae-rel_56_14 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
H1-18-all-fractions_k255_2741321_6
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6814..7443)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G7R1_HERAR
EAL domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:CAL62548.2}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
H1-18-all-fractions_k255_2741321_7
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8178..9542)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003793C39
erythromycin esterase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
H1-18-all-fractions_k255_2741321_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9639..11699)
DNA (2061bp) protein (687aa)
enoyl-CoA hydratase n=1 Tax=Duganella zoogloeoides RepID=UPI00037DF162
Phenylacetic acid degradation protein paaN {ECO:0000313|EMBL:KFC67762.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
paaN; phenylacetic acid degradation protein paaN
H1-18-all-fractions_k255_2741321_9
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11702..12313)
DNA (612bp) protein (204aa)
Phenylacetic acid degradation protein PaaY n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DGH5_9BURK
Phenylacetic acid degradation protein PaaY {ECO:0000313|EMBL:EKU83328.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
bacterial transferase hexapeptide family protein
H1-18-all-fractions_k255_2741321_10
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12324..13040)
DNA (717bp) protein (239aa)
amino acid ABC transporter ATPase n=1 Tax=Janthinobacterium lividum RepID=UPI00028992F3
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHA79888.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
Branched-chain amino acid transport ATP-binding protein LivF
H1-18-all-fractions_k255_2741321_11
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13037..13792)
DNA (756bp) protein (252aa)
ABC transporter ATP-binding protein n=1 Tax=Janthinobacterium lividum RepID=UPI000289CA61
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:EZP41619.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
branched-chain amino acid ABC transporter, ATP-binding protein
H1-18-all-fractions_k255_2741321_12
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13792..14745)
DNA (954bp) protein (318aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034C1385
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KHA79759.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
Branched-chain amino acid transport system permease protein LivM
H1-18-all-fractions_k255_2741321_13
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14742..15617)
DNA (876bp) protein (292aa)
ABC transporter permease n=1 Tax=Janthinobacterium lividum RepID=UPI000287DA89
ABC transporter permease {ECO:0000313|EMBL:KHA79760.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
inner-membrane translocator
H1-18-all-fractions_k255_2741321_14
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15643..16794)
DNA (1152bp) protein (384aa)
ABC transporter substrate-binding protein n=1 Tax=Janthinobacterium lividum RepID=UPI00028832D5
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHA79761.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
extracellular ligand-binding receptor
H1-18-all-fractions_k255_2741321_15
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16839..18053)
DNA (1215bp) protein (405aa)
3-oxoadipyl-CoA thiolase n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DFG7_9BURK
3-oxoadipyl-CoA thiolase {ECO:0000313|EMBL:EJL90894.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
paaJ; beta-ketoadipyl CoA thiolase
H1-18-all-fractions_k255_2741321_16
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18066..19379)
DNA (1314bp) protein (438aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
paaF; phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-CoA ligase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DJ94_9BURK
H1-18-all-fractions_k255_2741321_17
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19389..19841)
DNA (453bp) protein (151aa)
Phenylacetic acid degradation protein PaaD n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E1P6_9BURK
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KFI05916.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
paaD; phenylacetic acid degradation protein PaaD
H1-18-all-fractions_k255_2741321_18
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19834..21399)
DNA (1566bp) protein (522aa)
paaC; 3-hydroxyacyl-CoA dehydrogenase PaaC (EC:1.1.1.-)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003463924
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KHA79765.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
H1-18-all-fractions_k255_2741321_19
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21403..22200)
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase PaaG {ECO:0000313|EMBL:KFC67768.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KFC67768.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
paaB; phenylacetate degradation putative enoyl-CoA hydratase paaB (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Massilia niastensis RepID=UPI00037B9851
H1-18-all-fractions_k255_2741321_20
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22237..23313)
DNA (1077bp) protein (359aa)
ferredoxin n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034821CA
Phenylacetate-CoA oxygenase/reductase PaaE subunit {ECO:0000313|EMBL:EZP41610.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
oxidoreductase FAD-binding domain protein
H1-18-all-fractions_k255_2741321_21
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23324..23851)
DNA (528bp) protein (176aa)
phenylacetic acid degradation protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034A9A3B
Phenylacetate-CoA oxygenase PaaD subunit {ECO:0000313|EMBL:EZP41609.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
paaJ; phenylacetate-CoA oxygenase, PaaJ subunit
H1-18-all-fractions_k255_2741321_22
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23851..24603)
DNA (753bp) protein (251aa)
phenylacetic acid degradation protein n=1 Tax=Janthinobacterium lividum RepID=UPI000289B1B8
paaC; phenylacetic acid degradation protein paaC
Phenylacetic acid degradation protein paaC {ECO:0000313|EMBL:CDG81297.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_2741321_23
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24612..24896)
DNA (285bp) protein (95aa)
phenylacetate-CoA oxygenase subunit PaaB n=1 Tax=Duganella zoogloeoides RepID=UPI00036B2630
Phenylacetate-CoA oxygenase PaaB subunit {ECO:0000313|EMBL:ELX10883.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
phenylacetic acid degradation B
H1-18-all-fractions_k255_2741321_24
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24944..25930)
DNA (987bp) protein (329aa)
phenylacetate-CoA oxygenase subunit PaaA n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000365854B
Phenylacetate-CoA oxygenase PaaA subunit {ECO:0000313|EMBL:ELX10884.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
phenylacetic acid catabolic family protein
Displaying 24 items

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