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H1-18-all-fractions_k255_3173315

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_3173315_1
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..948)
DNA (948bp) protein (316aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000361627C
H1-18-all-fractions_k255_3173315_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(949..1854)
DNA (906bp) protein (302aa)
ispA; geranyltranstransferase (EC:2.5.1.10)
geranyltranstransferase n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003810B9E
Geranyl transferase {ECO:0000313|EMBL:KGF82781.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_3173315_3
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1851..2057)
DNA (207bp) protein (69aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
xseB; exodeoxyribonuclease VII, small subunit (EC:3.1.11.6)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037F7129
H1-18-all-fractions_k255_3173315_4
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2534..3649
DNA (1116bp) protein (372aa)
Rieske (2Fe-2S) protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035E7587
rieske [2Fe-2S] domain protein
Rieske [2Fe-2S] domain protein {ECO:0000313|EMBL:CDG85165.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_3173315_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3666..4574
DNA (909bp) protein (303aa)
DMT family permease n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003460D35
Membrane protein {ECO:0000313|EMBL:KGF82784.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
conserved hypothetical protein
H1-18-all-fractions_k255_3173315_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4585..5430
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000361510C
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
rhodanese-like domain protein
H1-18-all-fractions_k255_3173315_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5564..6298)
DNA (735bp) protein (245aa)
divalent cation transporter n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000375B3F5
Divalent cation transporter {ECO:0000313|EMBL:KGF82786.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Zinc transporter
H1-18-all-fractions_k255_3173315_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6504..7748)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000378D6FD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
H1-18-all-fractions_k255_3173315_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7982..10732)
DNA (2751bp) protein (917aa)
polA; DNA polymerase I family protein (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003624EE3
DNA polymerase I {ECO:0000313|EMBL:KGF80756.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_3173315_10
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10935..11363
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000370966D
Uncharacterized protein {ECO:0000313|EMBL:KFC71977.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H1-18-all-fractions_k255_3173315_11
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11449..12408
DNA (960bp) protein (320aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PLT7_9BURK
H1-18-all-fractions_k255_3173315_12
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12405..13172
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000379A95D
Uncharacterized protein {ECO:0000313|EMBL:KFC71975.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
putative membrane protein
H1-18-all-fractions_k255_3173315_13
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13169..15475)
DNA (2307bp) protein (769aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
DNA-dependent helicase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000360B4DD
uvrD/REP helicase family protein
H1-18-all-fractions_k255_3173315_14
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15659..16678
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000345E12D
Putative transcriptional regulator RpiR family protein {ECO:0000313|EMBL:EZP41644.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
RpiR family transcriptional regulator
H1-18-all-fractions_k255_3173315_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16703..19459
DNA (2757bp) protein (919aa)
TonB-dependent receptor n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PHH4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF81499.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
tonB-dependent Receptor Plug domain protein
H1-18-all-fractions_k255_3173315_16
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19477..20733)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036AAF00
Uncharacterized protein {ECO:0000313|EMBL:KFI05535.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein
H1-18-all-fractions_k255_3173315_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20723..21610)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037DBECE
Uncharacterized protein {ECO:0000313|EMBL:KGF79869.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H1-18-all-fractions_k255_3173315_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22206..24269)
DNA (2064bp) protein (688aa)
Endothelin-converting enzyme, Metallo peptidase, MEROPS family M13 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SMK8_METPP
Peptidase M13 {ECO:0000313|EMBL:KGF80749.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
endothelin-converting protein 1
H1-18-all-fractions_k255_3173315_19
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24344..26215)
DNA (1872bp) protein (624aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000362F85E
Uncharacterized protein {ECO:0000313|EMBL:KFI07391.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
peptidase S11
H1-18-all-fractions_k255_3173315_20
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26454..27560)
DNA (1107bp) protein (369aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
adhC; bifunctional glutathione-dependent formaldehyde dehydrogenase/alcohol dehydrogenase class III oxidoreductase (EC:1.1.1.1 1.1.1.284)
Bifunctional glutathione-dependent formaldehyde dehydrogenase/alcohol dehydrogenase class III oxidoreductase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EF75_9BURK
H1-18-all-fractions_k255_3173315_21
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27770..28957
DNA (1188bp) protein (396aa)
alcohol dehydrogenase n=1 Tax=Massilia niastensis RepID=UPI00037C380A
Glutathione-dependent formaldehyde dehydrogenase {ECO:0000313|EMBL:KFC71422.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
alcohol dehydrogenase groes domain-containing protein
H1-18-all-fractions_k255_3173315_22
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28968..29726
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003816CC1
Uncharacterized protein {ECO:0000313|EMBL:KFC71421.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H1-18-all-fractions_k255_3173315_23
Marinobacter algicola, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30101..30499)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000378578A
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:EDM46296.1}; TaxID=443152 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter algicola DG893.;"
response regulator receiver
H1-18-all-fractions_k255_3173315_24
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30501..30941)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035C575D
Uncharacterized protein {ECO:0000313|EMBL:ELX12613.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
H1-18-all-fractions_k255_3173315_25
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31305..31937)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000362098C
response regulator
Putative response regulator receiver protein {ECO:0000313|EMBL:EZP40768.1}; Response regulator receiver protein {ECO:0000313|EMBL:KHA77059.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
H1-18-all-fractions_k255_3173315_26
unknown

Not on your lists

32113..32454
DNA (342bp) protein (114aa)

This feature has no annotations

H1-18-all-fractions_k255_3173315_27
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


32709..35513
DNA (2805bp) protein (935aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
valyl-tRNA synthase n=1 Tax=Janthinobacterium lividum RepID=UPI000288A984
H1-18-all-fractions_k255_3173315_28
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35547..35996
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002F47887
Signal peptide protein {ECO:0000313|EMBL:KFC71956.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
signal peptide protein
H1-18-all-fractions_k255_3173315_29
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35956..36444)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000368C37E
UPF0178 protein NC77_19130 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
yaiI; UPF0178 protein yaiI
H1-18-all-fractions_k255_3173315_30
unknown

Not on your lists

36655..37011
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000379C126
Displaying items 1-30 of 68 in total

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