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H1-18-all-fractions_k255_3598857

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_3598857_1
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..610
DNA (609bp) protein (203aa)
LysR family transcriptional regulator n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034B4968
Transcriptional regulator {ECO:0000313|EMBL:EZP41955.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
LysR family transcriptional regulator
H1-18-all-fractions_k255_3598857_2
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(607..1251)
DNA (645bp) protein (215aa)
2-hydroxychromene-2-carboxylate isomerase family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZ55_9DELT
nahD; 2-hydroxychromene-2-carboxylate isomerase
Tax=GWA2_Deltaproteobacteria_45_12_curated
H1-18-all-fractions_k255_3598857_3
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1265..2059)
DNA (795bp) protein (265aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
gloB; hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DN98_9BURK
H1-18-all-fractions_k255_3598857_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2129..2902
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D7N8_9BURK
Methyltransferase type 11 {ECO:0000313|EMBL:KGF82102.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
methyltransferase domain protein
H1-18-all-fractions_k255_3598857_5
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2933..3373
DNA (441bp) protein (147aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
rnhA; ribonuclease HI protein (EC:3.1.26.4)
RNaseH ribonuclease n=1 Tax=Massilia niastensis RepID=UPI00036EB007
H1-18-all-fractions_k255_3598857_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3402..4109
DNA (708bp) protein (236aa)
dnaQ; DNA polymerase III, epsilon subunit (EC:2.7.7.7)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00038099D7
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KGF82104.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_3598857_7
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4526..5299
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003817E49
Uncharacterized protein {ECO:0000313|EMBL:KIF29906.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
taurine dioxygenase
H1-18-all-fractions_k255_3598857_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5296..6243)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037F20D2
Putative transcription regulator protein, LysR {ECO:0000313|EMBL:KFC74977.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
putative transcription regulator protein, LysR
H1-18-all-fractions_k255_3598857_9
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6350..7444
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00035E4BE1
NADH:flavin oxidoreductase {ECO:0000313|EMBL:EOA05058.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
NADH:flavin oxidoreductase/NADH oxidase
H1-18-all-fractions_k255_3598857_10
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7575..9152
DNA (1578bp) protein (526aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EGQ3_9BURK
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EOA05056.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
methyl-accepting chemotaxis (MCP) signaling domain protein
H1-18-all-fractions_k255_3598857_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9177..11405)
DNA (2229bp) protein (743aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00035D65BA
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGF80473.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
H1-18-all-fractions_k255_3598857_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11402..11905)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003769B96
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KGF80474.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
[2Fe-2S] binding domain protein
H1-18-all-fractions_k255_3598857_13
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11918..13240)
DNA (1323bp) protein (441aa)
Gluconate 2-dehydrogenase (Acceptor) n=1 Tax=Burkholderia sp. TJI49 RepID=F0GBD2_9BURK
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:EGD01195.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
cytochrome c family protein
H1-18-all-fractions_k255_3598857_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13270..13974)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E75247
Bradyrhizobium elkanii strain UASWS1015 Contig154, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52852.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
branched-chain amino acid ABC transporter ATP-binding protein
H1-18-all-fractions_k255_3598857_15
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13986..14729)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E291A1
branched-chain amino acid ABC transporter ATP-binding protein
ATP-binding component of ABC transporter protein {ECO:0000313|EMBL:CCN23196.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
H1-18-all-fractions_k255_3598857_16
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14719..15717)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030310B3
ABC transporter permease
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:KDD53226.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
H1-18-all-fractions_k255_3598857_17
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15732..16616)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F1DFC6
ABC transporter permease {ECO:0000313|EMBL:KJC40727.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ABC transporter permease
H1-18-all-fractions_k255_3598857_18
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16642..17868)
DNA (1227bp) protein (409aa)
Putative Substrate-binding periplasmic protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IC36_BORPD
substrate-binding periplasmic protein
Putative Substrate-binding periplasmic protein {ECO:0000313|EMBL:CAP41518.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
H1-18-all-fractions_k255_3598857_19
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18071..18529
DNA (459bp) protein (153aa)
Bordetella petrii strain DSM 12804, complete genome n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IC34_BORPD
hypothetical protein
Bordetella petrii strain DSM 12804, complete genome {ECO:0000313|EMBL:CAP41517.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
H1-18-all-fractions_k255_3598857_20
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18555..19802
DNA (1248bp) protein (416aa)
2-polyprenyl-6-methoxyphenol hydroxylase n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FRG5_BURVI
FAD binding domain protein
FAD binding domain protein {ECO:0000313|EMBL:AIO37424.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
H1-18-all-fractions_k255_3598857_21
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19858..20610
DNA (753bp) protein (251aa)
Transcriptional regulator n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WIS5_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:KHQ98167.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
bacterial regulatory s, tetR family protein
H1-18-all-fractions_k255_3598857_22
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20633..21751)
DNA (1119bp) protein (373aa)
aminocarboxymuconate-semialdehyde decarboxylase (EC:4.1.1.45)
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HM04_9BRAD
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:ERF85476.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
H1-18-all-fractions_k255_3598857_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22033..23265
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037390C6
MFS transporter {ECO:0000313|EMBL:KGF78944.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
transporter
H1-18-all-fractions_k255_3598857_24
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23394..24842
DNA (1449bp) protein (483aa)
katA2; catalase KatA (EC:1.11.1.6)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498, ECO:0000313|EMBL:AJK45651.1};; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
Bordetella petrii strain DSM 12804, complete genome n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9M7_BORPD
H1-18-all-fractions_k255_3598857_25
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24839..26758)
DNA (1920bp) protein (640aa)
Sensor hybrid histidine kinase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PB64_9BURK
Sensor hybrid histidine kinase {ECO:0000313|EMBL:ELX07998.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
PAS/PAC sensor hybrid histidine kinase
H1-18-all-fractions_k255_3598857_26
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26755..28158)
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037C5863
hypothetical protein
H1-18-all-fractions_k255_3598857_27
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28177..29244)
DNA (1068bp) protein (356aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9P8Y1_9BURK
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ELX07996.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
anti-sigma regulatory factor
H1-18-all-fractions_k255_3598857_28
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29232..29699)
DNA (468bp) protein (156aa)
Serine/threonine protein kinase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9P8Q0_9BURK
Serine/threonine protein kinase {ECO:0000313|EMBL:ELX07995.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
anti-sigma regulatory factor, serine/threonine protein kinase
H1-18-all-fractions_k255_3598857_29
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29696..30085)
DNA (390bp) protein (130aa)
RsbT antagonist protein RsbS n=1 Tax=Janthinobacterium sp. HH01 RepID=L9P8S0_9BURK
RsbT antagonist protein RsbS {ECO:0000313|EMBL:ELX07994.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
anti-sigma-factor antagonist
H1-18-all-fractions_k255_3598857_30
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30088..30945)
DNA (858bp) protein (286aa)
RsbT co-antagonist protein RsbRA n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PB60_9BURK
RsbT co-antagonist protein RsbRA {ECO:0000313|EMBL:ELX07993.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
anti-sigma-factor antagonist
Displaying items 1-30 of 41 in total

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