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H1-18-all-fractions_k255_3855228

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_3855228_1
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..910
DNA (909bp) protein (303aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
50S rRNA methyltransferase n=1 Tax=Janthinobacterium lividum RepID=UPI000287A948
radical SAM superfamily protein
H1-18-all-fractions_k255_3855228_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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907..1713
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000367B7CA
Pilus assembly protein PilF {ECO:0000313|EMBL:KGF78567.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pilF; type IV pilus biogenesis/stability protein PilW
H1-18-all-fractions_k255_3855228_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1727..2701
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCU2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF78566.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
transmembrane protein
H1-18-all-fractions_k255_3855228_4
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2764..4005
DNA (1242bp) protein (414aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Janthinobacterium lividum RepID=UPI000289E184
H1-18-all-fractions_k255_3855228_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4007..5353
DNA (1347bp) protein (449aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
histidyl-tRNA synthase n=1 Tax=Massilia niastensis RepID=UPI000371E837
H1-18-all-fractions_k255_3855228_6
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5383..6054
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DUZ3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82492.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
putative uncharacterized protein
H1-18-all-fractions_k255_3855228_7
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6099..7256
DNA (1158bp) protein (386aa)
Outer membrane protein assembly factor BamB n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DE14_9BURK
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
yfgL; outer membrane assembly lipoprotein YfgL
H1-18-all-fractions_k255_3855228_8
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7259..8599
DNA (1341bp) protein (447aa)
GTP-binding protein Der n=1 Tax=Massilia niastensis RepID=UPI000377F054
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
engA; GTP-binding protein EngA
H1-18-all-fractions_k255_3855228_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8735..8971
DNA (237bp) protein (79aa)
RNA-binding protein Hfq n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EA2100
RNA-binding protein Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_3855228_10
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9020..10246
DNA (1227bp) protein (409aa)
GTP-binding proten HflX n=1 Tax=Duganella zoogloeoides RepID=UPI00036C2E29
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hflX; GTP-binding proten HflX
H1-18-all-fractions_k255_3855228_11
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10248..11543
DNA (1296bp) protein (432aa)
HflK protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DUZ7_9BURK
HflK protein {ECO:0000313|EMBL:KFC68508.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hflK; HflKC membrane-associated complex associates with HflC, part of modulator for protease specific for FtsH phage lambda cII repressor
H1-18-all-fractions_k255_3855228_12
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11543..12442
DNA (900bp) protein (300aa)
membrane protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034AE0E5
hflC; hflC protein
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
Displaying 12 items

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