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H1-18-all-fractions_k255_4285465

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_4285465_1
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..116)
DNA (114bp) protein (38aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
trpA; tryptophan synthase, alpha subunit (EC:4.2.1.20)
tryptophan synthase subunit alpha n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003750E28
H1-18-all-fractions_k255_4285465_2
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164..1375)
DNA (1212bp) protein (404aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
trpB; tryptophan synthase, beta subunit (EC:4.2.1.20)
tryptophan synthase subunit alpha n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003804BDC
H1-18-all-fractions_k255_4285465_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1395..2099)
DNA (705bp) protein (235aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000374A6C5
N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein
H1-18-all-fractions_k255_4285465_4
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2116..2922)
DNA (807bp) protein (269aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:CDG84227.1}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:CDG84227.1};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
tRNA pseudouridine synthase A n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PEK7_9BURK
H1-18-all-fractions_k255_4285465_5
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3326..6289)
DNA (2964bp) protein (988aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036A912F
Tfp pilus assembly FimV protein {ECO:0000313|EMBL:KFC66021.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
lysM domain protein
H1-18-all-fractions_k255_4285465_6
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6584..7711)
DNA (1128bp) protein (376aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
aspartate-semialdehyde dehydrogenase n=1 Tax=Janthinobacterium lividum RepID=UPI0002894BAA
H1-18-all-fractions_k255_4285465_7
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7742..8812)
DNA (1071bp) protein (357aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DJS0_9BURK
H1-18-all-fractions_k255_4285465_8
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8831..9565)
DNA (735bp) protein (245aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
leuD; 3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003692A2D
H1-18-all-fractions_k255_4285465_9
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9519..9641)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E5G2_9BURK
entericidin EcnA/B family protein
Entericidin EcnA/B family protein {ECO:0000313|EMBL:EZP40069.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
H1-18-all-fractions_k255_4285465_10
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9689..11092)
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
isopropylmalate isomerase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000381FFAB
H1-18-all-fractions_k255_4285465_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11296..13185)
DNA (1890bp) protein (630aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
chemotaxis protein CheA n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036064DE
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
H1-18-all-fractions_k255_4285465_12
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13185..14057)
DNA (873bp) protein (291aa)
cheZ; phosphatase CheZ domain protein (EC:3.1.3.-)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035D99B0
Chemotaxis protein CheZ {ECO:0000313|EMBL:KHA78296.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
H1-18-all-fractions_k255_4285465_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14437..14901
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037539C2
Uncharacterized protein {ECO:0000313|EMBL:KGF81568.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
universal stress family protein
H1-18-all-fractions_k255_4285465_14
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15047..15691
DNA (645bp) protein (215aa)
LuxR family transcriptional regulator n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036C6E59
Two component transcriptional regulator LuxR family {ECO:0000313|EMBL:ELX10095.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
response regulator
H1-18-all-fractions_k255_4285465_15
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16080..16934
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DMY6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU84581.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
cyclic nucleotide-binding domain protein
H1-18-all-fractions_k255_4285465_16
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16991..18070)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122Z6_POLSJ
Uncharacterized protein {ECO:0000313|EMBL:KFC66010.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H1-18-all-fractions_k255_4285465_17
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18204..18854)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000372513E
Metallophosphoesterase {ECO:0000313|EMBL:KFC66009.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
calcineurin-like phosphoesterase family protein
H1-18-all-fractions_k255_4285465_18
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18851..21334)
DNA (2484bp) protein (828aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIH9_9BURK
DEAD/DEAH box helicase {ECO:0000313|EMBL:KFI06870.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
DEAD/DEAH box helicase family protein
H1-18-all-fractions_k255_4285465_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21374..23020)
DNA (1647bp) protein (549aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:KGF81563.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KGF81563.1};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E5H0_9BURK
ATP dependent DNA ligase domain protein
H1-18-all-fractions_k255_4285465_20
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23013..24083)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DMZ0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU84586.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
mRNA 3''''-end processing factor
H1-18-all-fractions_k255_4285465_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24092..25798)
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036A9EF3
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KGF81562.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ATP-dependent DNA helicase RecQ
H1-18-all-fractions_k255_4285465_22
unknown

Not on your lists

26010..26126
DNA (117bp) protein (39aa)

This feature has no annotations

H1-18-all-fractions_k255_4285465_23
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26181..26666)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DMZ3_9BURK
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:KFC65996.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
response regulator receiver sensor signal transduction histidine kinase
Displaying 23 items

View Taxonomy