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H1-18-all-fractions_k255_4477403

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_4477403_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(339..1628)
DNA (1290bp) protein (430aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
serS; seryl-tRNA synthetase (EC:6.1.1.11)
seryl-tRNA synthetase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000381502F
H1-18-all-fractions_k255_4477403_2
unknown

Not on your lists

comp(1732..1935)
DNA (204bp) protein (68aa)

This feature has no annotations

H1-18-all-fractions_k255_4477403_3
unknown

Not on your lists

comp(1961..2161)
DNA (201bp) protein (67aa)

This feature has no annotations

H1-18-all-fractions_k255_4477403_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2480..3781)
DNA (1302bp) protein (434aa)
ATPase AAA n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036088CF
Recombination factor protein RarA {ECO:0000313|EMBL:KGF78251.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Holliday junction DNA helicase
H1-18-all-fractions_k255_4477403_5
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3798..4415)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00036364B2
lolA; outer-membrane lipoprotein carrier protein
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
H1-18-all-fractions_k255_4477403_6
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4432..6798)
DNA (2367bp) protein (789aa)
cell division protein FtsK n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003731C92
DNA translocase ftsK {ECO:0000313|EMBL:ELX13662.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
ftsK; DNA translocase ftsK
H1-18-all-fractions_k255_4477403_7
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7005..7961
DNA (957bp) protein (319aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9)
thioredoxin reductase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000344ADF0
H1-18-all-fractions_k255_4477403_8
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7968..8639
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000379E0B9
DNA mismatch repair protein MutS {ECO:0000313|EMBL:KFI06497.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
smr domain protein
H1-18-all-fractions_k255_4477403_9
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8833..9438
DNA (606bp) protein (202aa)
membrane protein n=1 Tax=Massilia niastensis RepID=UPI00036B476B
Uncharacterized protein {ECO:0000313|EMBL:EKU80563.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
UPF0126 domain protein
H1-18-all-fractions_k255_4477403_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9580..9918)
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II 1 n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035C3510
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:KGF80002.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glnB; nitrogen regulatory P-II protein
H1-18-all-fractions_k255_4477403_11
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9983..12049)
DNA (2067bp) protein (689aa)
NAD synthetase/Glutamine amidotransferase chain of NAD synthetase {ECO:0000313|EMBL:AEK62579.1}; EC=6.3.5.1 {ECO:0000313|EMBL:AEK62579.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
nadE; NAD synthetase (EC:6.3.5.1)
NAD synthetase/Glutamine amidotransferase chain of NAD synthetase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A9F6_COLFT
H1-18-all-fractions_k255_4477403_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12178..13314
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000380A003
Uncharacterized protein {ECO:0000313|EMBL:KGF80004.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
conserved hypothetical protein
H1-18-all-fractions_k255_4477403_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13541..15895
DNA (2355bp) protein (785aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003630661
Uncharacterized protein {ECO:0000313|EMBL:KGF80011.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
TonB-dependent receptor
H1-18-all-fractions_k255_4477403_14
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16009..16914)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003705A3A
LysR family transcription regulator protein {ECO:0000313|EMBL:KFC71511.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
LysR family transcriptional regulator
H1-18-all-fractions_k255_4477403_15
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17115..18023
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003699B04
Alpha/beta hydrolase {ECO:0000313|EMBL:KFI06488.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
alpha/beta hydrolase
H1-18-all-fractions_k255_4477403_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18142..19338
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036E952A
ABC transporter permease {ECO:0000313|EMBL:KGF80013.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ABC transporter substrate-binding protein
H1-18-all-fractions_k255_4477403_17
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19354..20121
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003618E1E
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC71515.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
amino acid ABC transporter ATP-binding protein
H1-18-all-fractions_k255_4477403_18
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20114..20839
DNA (726bp) protein (242aa)
ABC transporter ATP-binding protein n=1 Tax=Massilia niastensis RepID=UPI00036D81FE
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI06485.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
livF; High-affinity branched-chain amino acid transport ATP-binding protein
H1-18-all-fractions_k255_4477403_19
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20853..21881
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037F7B2E
Uncharacterized protein {ECO:0000313|EMBL:EKU80541.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
inner-membrane translocator
H1-18-all-fractions_k255_4477403_20
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21900..23033
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035E9215
ABC transporter permease {ECO:0000313|EMBL:KFI06483.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
inner-membrane translocator
H1-18-all-fractions_k255_4477403_21
unknown

Not on your lists

23129..23476
DNA (348bp) protein (116aa)
PEP-CTERM putative exosortase interaction domain protein
H1-18-all-fractions_k255_4477403_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23463..24884
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D8G8_9BURK
Peptidase {ECO:0000313|EMBL:KGF80020.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
PA domain protein
H1-18-all-fractions_k255_4477403_23
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25053..25589)
DNA (537bp) protein (179aa)
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209, ECO:0000313|EMBL:CDG82070.1}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209, ECO:0000313|EMBL:CDG82070.1};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
inorganic pyrophosphatase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000372BBFB
H1-18-all-fractions_k255_4477403_24
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25685..26881)
DNA (1197bp) protein (399aa)
porphyrin biosynthesis protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000371965A
HemY domain-containing-protein {ECO:0000313|EMBL:EZP35040.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hemY N-terminus family protein
H1-18-all-fractions_k255_4477403_25
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26885..28021)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035E6DE5
Uroporphyrin-III methyltransferase {ECO:0000313|EMBL:KHA76503.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hemX family protein
H1-18-all-fractions_k255_4477403_26
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28018..28821)
DNA (804bp) protein (268aa)
Uroporphyrinogen III synthase {ECO:0000313|EMBL:KFC71525.1}; EC=4.2.1.75 {ECO:0000313|EMBL:KFC71525.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035F5C87
uroporphyrinogen-III synthase HemD family protein
H1-18-all-fractions_k255_4477403_27
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28811..29965)
DNA (1155bp) protein (385aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DT23_9BURK
H1-18-all-fractions_k255_4477403_28
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29988..31073
DNA (1086bp) protein (362aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
ppc; phosphoenolpyruvate carboxylase (EC:4.1.1.31)
phosphoenolpyruvate carboxylase n=1 Tax=Janthinobacterium lividum RepID=UPI000288A068
Displaying 28 items

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