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H1-18-all-fractions_k255_5118118

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_5118118_1
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2144
DNA (2142bp) protein (714aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003462112
PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
H1-18-all-fractions_k255_5118118_2
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2533..5235
DNA (2703bp) protein (901aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003470C23
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EZP34874.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
flavin containing amine oxidoreductase family protein
H1-18-all-fractions_k255_5118118_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5402..6562
DNA (1161bp) protein (387aa)
alcohol dehydrogenase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036AF038
zinc-containing alcohol dehydrogenase superfamily protein
Glutathione-independent formaldehyde dehydrogenase {ECO:0000313|EMBL:ABB75442.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
H1-18-all-fractions_k255_5118118_4
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6764..9919
DNA (3156bp) protein (1052aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000369F959
PAS/PAC sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
H1-18-all-fractions_k255_5118118_5
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9935..10705)
DNA (771bp) protein (257aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Acidovorax sp. CF316 RepID=J1EHM4_9BURK
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJE51801.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
putative extracellular solute-binding protein
H1-18-all-fractions_k255_5118118_6
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10702..11163)
DNA (462bp) protein (154aa)
N-acetyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B308E7
N-acetyltransferase {ECO:0000313|EMBL:KFN43055.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
putative N-acetyltransferase
H1-18-all-fractions_k255_5118118_7
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11222..12793)
DNA (1572bp) protein (524aa)
Methyl-accepting chemotaxis I (Serine chemoreceptor protein) transmembrane protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXM8_JANMA
cheD1; methyl-accepting chemotaxis I transmembrane protein
Methyl-accepting chemotaxis I (Serine chemoreceptor protein) transmembrane protein {ECO:0000313|EMBL:ABR90626.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
H1-18-all-fractions_k255_5118118_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13148..13612
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D5B0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFC68291.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H1-18-all-fractions_k255_5118118_9
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13702..15057
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037FA035
Uncharacterized protein {ECO:0000313|EMBL:KIF80559.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
H1-18-all-fractions_k255_5118118_10
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15209..15664)
DNA (456bp) protein (152aa)
cytochrome C n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00036D3E06
cycA; cytochrome c2
Cytochrome c2 {ECO:0000313|EMBL:CDG85991.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_5118118_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15865..17763)
DNA (1899bp) protein (633aa)
Putative permease n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HJN1_9BURK
Transporter {ECO:0000313|EMBL:KGF78370.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
membrane transport protein
H1-18-all-fractions_k255_5118118_12
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18809..19903
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000367B4BD
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
H1-18-all-fractions_k255_5118118_13
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20002..20262
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D4M7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL84599.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
H1-18-all-fractions_k255_5118118_14
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20290..21990)
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003742C23
Histidine kinase {ECO:0000313|EMBL:KFI06935.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
histidine kinase
H1-18-all-fractions_k255_5118118_15
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21980..23491)
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037BEE6D
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:KFC65931.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H1-18-all-fractions_k255_5118118_16
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23764..25929
DNA (2166bp) protein (722aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036C3832
PAS domain S-box protein {ECO:0000313|EMBL:EZP34890.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
sensory box protein
H1-18-all-fractions_k255_5118118_17
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26245..27144)
DNA (900bp) protein (300aa)
Sulfonate/nitrate ABC transporter permease n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EAS9_9BURK
Sulfonate/nitrate ABC transporter permease {ECO:0000313|EMBL:EKZ96336.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
sulfonate/nitrate ABC transporter permease
H1-18-all-fractions_k255_5118118_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27141..28010)
DNA (870bp) protein (290aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003708237
Sulfonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF81734.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_5118118_19
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28012..29010)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000369DE2E
ABC-type nitrate/sulfonate/bicarbonate transporter periplasmic ligand binding protein {ECO:0000313|EMBL:KFC66633.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
NMT1-like family protein
H1-18-all-fractions_k255_5118118_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29043..29966)
DNA (924bp) protein (308aa)
tauD; alpha-ketoglutarate-dependent taurine dioxygenase (EC:1.14.11.17)
Taurine catabolism dioxygenase TauD, TfdA family n=1 Tax=uncultured organism RepID=T1WBQ4_9ZZZZ
Taurine dioxygenase {ECO:0000313|EMBL:KGF81732.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_5118118_21
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30079..30816)
DNA (738bp) protein (246aa)
Extracellular solute-binding protein family 3 n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J2L1_PSEUL
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:BAK76387.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
H1-18-all-fractions_k255_5118118_22
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30813..32807)
DNA (1995bp) protein (665aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036DB81D
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKU82979.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
diguanylate cyclase domain protein
H1-18-all-fractions_k255_5118118_23
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33129..33500
DNA (372bp) protein (124aa)
Copper resistance protein CopC n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PA16_9BURK
Copper resistance protein {ECO:0000313|EMBL:KFC63476.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
copper resistance CopC family protein
H1-18-all-fractions_k255_5118118_24
unknown

Not on your lists

33511..34257
DNA (747bp) protein (249aa)
Inner membrane protein yebZ n=1 Tax=Erwinia piriflorinigrans CFBP 5888 RepID=V5Z971_9ENTR
Displaying 24 items

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