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H1-18-all-fractions_k255_5142473

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_5142473_1
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(781..3021)
DNA (2241bp) protein (747aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003664F29
Uncharacterized protein {ECO:0000313|EMBL:EKU83184.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
integral membrane sensor hybrid histidine kinase
H1-18-all-fractions_k255_5142473_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3194..5089)
DNA (1896bp) protein (632aa)
glycerol acyltransferase n=1 Tax=Massilia niastensis RepID=UPI0003827BEC
Glycerol acyltransferase {ECO:0000313|EMBL:KGF81637.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
major Facilitator Superfamily protein
H1-18-all-fractions_k255_5142473_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5296..5769
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003678D2F
Uncharacterized protein {ECO:0000313|EMBL:KFC61543.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H1-18-all-fractions_k255_5142473_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5772..6557
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003484DFF
Uncharacterized protein {ECO:0000313|EMBL:KGF81743.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative outer membrane protein
H1-18-all-fractions_k255_5142473_5
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6665..7189
DNA (525bp) protein (175aa)
NTF2-like protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PDP8_9BURK
NTF2-like protein {ECO:0000313|EMBL:ELX09744.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
H1-18-all-fractions_k255_5142473_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7231..8265
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00035DB8DF
Histidine kinase {ECO:0000313|EMBL:KGF82714.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H1-18-all-fractions_k255_5142473_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8262..9017
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00036BB760
Sensory transduction protein lytT {ECO:0000313|EMBL:KGF82715.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H1-18-all-fractions_k255_5142473_8
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9027..10121
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000364C33C
Peptidase S41 family protein {ECO:0000313|EMBL:EZP41177.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
interphotoreceptor retinoid-binding protein
H1-18-all-fractions_k255_5142473_9
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10244..10819)
DNA (576bp) protein (192aa)
Regulatory protein TetR n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XJN2_9RALS
Transcriptional regulator {ECO:0000313|EMBL:KGE50690.1}; TaxID=325777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. vasculorum.;"
transcriptional regulator TetR family
H1-18-all-fractions_k255_5142473_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10954..12363
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI00036B5799
Amidase {ECO:0000313|EMBL:EHK79412.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
amidase
H1-18-all-fractions_k255_5142473_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12358..12786)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00035F0315
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU38338.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
H1-18-all-fractions_k255_5142473_12
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12928..14010)
DNA (1083bp) protein (361aa)
lipase n=1 Tax=Janthinobacterium lividum RepID=UPI000289325E
ABC transporter family protein
Lipase {ECO:0000313|EMBL:KHA76943.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
H1-18-all-fractions_k255_5142473_13
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14023..15822)
DNA (1800bp) protein (600aa)
SfuB n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VZ40_9BURK
SfuB {ECO:0000313|EMBL:EGF32130.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
binding--dependent transport system inner membrane component family protein
H1-18-all-fractions_k255_5142473_14
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16005..17102)
DNA (1098bp) protein (366aa)
Fe(3+) ABC transport system substrate binding protein n=1 Tax=Janthinobacterium sp. HH01 PF82_9BURK">RepID=L9PF82_9BURK
Fe(3+) ABC transport system substrate binding protein {ECO:0000313|EMBL:ELX10006.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
bacterial extracellular solute-binding family protein
H1-18-all-fractions_k255_5142473_15
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17148..18131)
DNA (984bp) protein (328aa)
Extracytoplasmic tricarboxylate-binding receptor TctC n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PEJ1_9BURK
Extracytoplasmic tricarboxylate-binding receptor TctC {ECO:0000313|EMBL:ELX10007.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
bordetella uptake gene (bug) product family protein
H1-18-all-fractions_k255_5142473_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18142..19221)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037457D7
Porin {ECO:0000313|EMBL:KGF81629.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
gram-negative porin family protein
H1-18-all-fractions_k255_5142473_17
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19455..20165
DNA (711bp) protein (237aa)
transcriptional regulator n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F4C74
response regulator
Response regulator {ECO:0000313|EMBL:CDG84169.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_5142473_18
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20167..21642
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
Signal transduction histidine kinase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PEE5_9BURK
HAMP domain protein
H1-18-all-fractions_k255_5142473_19
unknown

Not on your lists

21706..21936
DNA (231bp) protein (77aa)

This feature has no annotations

H1-18-all-fractions_k255_5142473_20
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22019..23341)
DNA (1323bp) protein (441aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
homoserine dehydrogenase (EC:1.1.1.3)
homoserine dehydrogenase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003723E39
H1-18-all-fractions_k255_5142473_21
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23378..24604)
DNA (1227bp) protein (409aa)
Aspartate aminotransferase (EC:2.6.1.1)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DZS0_9BURK
Aminotransferase {ECO:0000313|EMBL:KFI06824.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
H1-18-all-fractions_k255_5142473_22
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24841..25236
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DDC2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFC76144.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H1-18-all-fractions_k255_5142473_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25236..26936
DNA (1701bp) protein (567aa)
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase ArnT n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PEL0_9BURK
Glycosyltransferase {ECO:0000313|EMBL:KGF81611.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
dolichyl-phosphate-mannose-mannosyltransferase family protein
H1-18-all-fractions_k255_5142473_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27063..27437
DNA (375bp) protein (125aa)
Cation/cationic drug transporter n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HX58_9BURK
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:KGF81610.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
drug/metabolite transporter superfamily permease
H1-18-all-fractions_k255_5142473_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27541..28710
DNA (1170bp) protein (390aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PEJ2_9BURK
Aminotransferase DegT {ECO:0000313|EMBL:KGF81609.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
aminotransferase class-V family protein
H1-18-all-fractions_k255_5142473_26
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28707..29708
DNA (1002bp) protein (334aa)
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00037E7C72
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase {ECO:0000313|EMBL:KGF81608.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
H1-18-all-fractions_k255_5142473_27
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29705..30607
DNA (903bp) protein (301aa)
Methionyl-tRNA formyltransferase {ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|SAAS:SAAS00150580};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036AB921
formyl transferase, C-terminal domain protein
H1-18-all-fractions_k255_5142473_28
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30627..31679
DNA (1053bp) protein (351aa)
NAD-dependent dehydratase n=1 Tax=Janthinobacterium lividum RepID=UPI00028978AF
NAD dependent epimerase/dehydratase family protein
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:CDG84178.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_5142473_29
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31684..32682
DNA (999bp) protein (333aa)
xylanase/chitin deacetylase protein (EC:3.5.1.41)
xylanase n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036D69F9
Xylanase {ECO:0000313|EMBL:KGF81605.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_5142473_30
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32675..33160
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DEN2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82703.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
ahpC/TSA family protein
Displaying items 1-30 of 42 in total

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