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H1-18-all-fractions_k255_5149372

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_5149372_1
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..1697
DNA (1695bp) protein (565aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
elongation factor 4 n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035F792D
lepA; GTP-binding protein LepA
H1-18-all-fractions_k255_5149372_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1697..2611
DNA (915bp) protein (305aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
lepB; signal peptidase I (EC:3.4.21.89)
signal peptidase n=1 Tax=Massilia niastensis RepID=UPI00035C6E9C
H1-18-all-fractions_k255_5149372_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2639..3043
DNA (405bp) protein (135aa)
Putative membrane protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PDP6_9BURK
Putative membrane protein {ECO:0000313|EMBL:KFC74915.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
putative transmembrane protein
H1-18-all-fractions_k255_5149372_4
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3073..3987
DNA (915bp) protein (305aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
rnc; ribonuclease III (EC:3.1.26.3)
RNase III, ds RNA (partial match) n=1 Tax=Janthinobacterium lividum RepID=UPI000289C299
H1-18-all-fractions_k255_5149372_5
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3984..4907
DNA (924bp) protein (308aa)
GTPase Era n=1 Tax=Duganella zoogloeoides RepID=UPI000377F91B
era; GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_5149372_6
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4930..5763
DNA (834bp) protein (278aa)
DNA repair protein RecO n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DU84_9BURK
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
recO; DNA repair protein RecO
H1-18-all-fractions_k255_5149372_7
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5777..6550
DNA (774bp) protein (258aa)
pdxJ; pyridoxal phosphate biosynthetic protein PdxJ (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
pyridoxine 5''''-phosphate synthase n=1 Tax=Janthinobacterium lividum RepID=UPI000287C69B
H1-18-all-fractions_k255_5149372_8
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6552..6947
DNA (396bp) protein (132aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
4''''-phosphopantetheinyl transferase n=1 Tax=Massilia niastensis RepID=UPI0003824D75
H1-18-all-fractions_k255_5149372_9
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6961..7326
DNA (366bp) protein (122aa)
excinuclease ABC subunit C n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035DB9EC
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
uvrC; excinuclease ABC subunit C
Displaying 9 items

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