ggKbase home page

H1-18-all-fractions_k255_5865447

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_5865447_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..193
DNA (192bp) protein (64aa)
LysR family transcriptional regulator n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000360D8B6
LysR family transcriptional regulator {ECO:0000313|EMBL:KGF82738.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
bacterial regulatory helix-turn-helix , lysR family protein
H1-18-all-fractions_k255_5865447_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198..590)
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF82739.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_5865447_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

720..1574
DNA (855bp) protein (285aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00210629}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00272707};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Massilia niastensis RepID=UPI000366F889
4-hydroxybenzoate polyprenyltransferase
H1-18-all-fractions_k255_5865447_4
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1648..1971
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DDU0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFC72014.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
conserved hypothetical protein
H1-18-all-fractions_k255_5865447_5
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2061..2888)
DNA (828bp) protein (276aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
Pyrroline-5-carboxylate reductase (EC:1.5.1.2)
pyrroline-5-carboxylate reductase n=1 Tax=Massilia niastensis RepID=UPI0003627D40
H1-18-all-fractions_k255_5865447_6
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2881..3582)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037BEF40
Pyridoxal phosphate enzyme YggS family protein {ECO:0000313|EMBL:EZP40734.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
enzyme with a TIM-barrel fold protein
H1-18-all-fractions_k255_5865447_7
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3673..4716
DNA (1044bp) protein (348aa)
Twitching mobility protein PilT n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PMI6_9BURK
Twitching mobility protein PilT {ECO:0000313|EMBL:ELX12641.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
pilT; twitching mobility protein
H1-18-all-fractions_k255_5865447_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4726..5862
DNA (1137bp) protein (379aa)
twitching motility protein PilT n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003796145
Twitching motility protein {ECO:0000313|EMBL:KFC72008.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
twitching motility family protein
H1-18-all-fractions_k255_5865447_9
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5862..6344
DNA (483bp) protein (161aa)
glutathione peroxidase n=1 Tax=Duganella zoogloeoides RepID=UPI00037C0D5B
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
glutathione peroxidase family protein
H1-18-all-fractions_k255_5865447_10
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6474..8057
DNA (1584bp) protein (528aa)
Candidate histidine kinase, hybrid n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3E7_RAMTT
hybrid histidine kinase
Candidate histidine kinase, hybrid {ECO:0000313|EMBL:AEG92421.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
H1-18-all-fractions_k255_5865447_11
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8054..9727)
DNA (1674bp) protein (558aa)
PAS domain S-box protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DE06_9BURK
PAS domain S-box protein {ECO:0000313|EMBL:EKU82483.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
pas/pac sensor hybrid histidine kinase
H1-18-all-fractions_k255_5865447_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9724..10950)
DNA (1227bp) protein (409aa)
glcF; glycolate oxidase iron-sulfur subunit (EC:1.1.3.15)
glycolate oxidase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003620E12
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_5865447_13
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10954..12030)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036ED4A9
Uncharacterized protein {ECO:0000313|EMBL:EKU81343.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
FAD binding domain protein
H1-18-all-fractions_k255_5865447_14
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12056..13537)
DNA (1482bp) protein (494aa)
FAD-binding protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036519EC
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:KFC71998.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
FAD linked oxidases, C-terminal domain protein
H1-18-all-fractions_k255_5865447_15
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14057..14608
DNA (552bp) protein (184aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase YvqK {ECO:0000313|EMBL:ELX12633.1}; EC=2.5.1.17 {ECO:0000313|EMBL:ELX12633.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
Cob(I)yrinic acid a,c-diamide adenosyltransferase YvqK n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PP60_9BURK
ATP:cob(I)alamin adenosyltransferase, putative
H1-18-all-fractions_k255_5865447_16
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14737..16149)
DNA (1413bp) protein (471aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000363F8B2
Displaying 16 items

View Taxonomy