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H1-18-all-fractions_k255_6175555

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_6175555_1
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..2306)
DNA (2304bp) protein (768aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
ribonucleoside-diphosphate reductase, alpha subunit (EC:1.17.4.1)
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000368619F
H1-18-all-fractions_k255_6175555_2
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2612..3253)
DNA (642bp) protein (214aa)
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD {ECO:0000313|EMBL:ELX10802.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ELX10802.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PGR8_9BURK
N-acetylmuramoyl-L-alanine amidase family protein
H1-18-all-fractions_k255_6175555_3
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3250..4671)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037FDA8E
Uncharacterized protein {ECO:0000313|EMBL:EKU83065.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
pilR; type 4 fimbriae expression regulatory protein
H1-18-all-fractions_k255_6175555_4
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4682..6361)
DNA (1680bp) protein (560aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D847E
his Kinase A domain protein
H1-18-all-fractions_k255_6175555_5
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6363..6632)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035CFDDF
Putative membrane protein {ECO:0000313|EMBL:KFC64305.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
putative uncharacterized protein
H1-18-all-fractions_k255_6175555_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6629..7441)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036DA165
ABC transporter permease {ECO:0000313|EMBL:KGF79401.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ABC transporter permease
H1-18-all-fractions_k255_6175555_7
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7651..7896
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S907_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KDP86612.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
thiamine pyrophosphate-requiring enzyme
H1-18-all-fractions_k255_6175555_8
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7886..8296
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q7WWW5_CUPNH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAP86126.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
H1-18-all-fractions_k255_6175555_9
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8303..9100)
DNA (798bp) protein (266aa)
sulfonate ABC transporter ATP-binding protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034B02AC
Nitrate/sulfonate/bicarbonate ABC transport system ATP-binding protein {ECO:0000313|EMBL:ELX10807.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
nitrate/sulfonate/bicarbonate ABC transporter ATPase
H1-18-all-fractions_k255_6175555_10
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9100..9918)
DNA (819bp) protein (273aa)
sulfonate ABC transporter permease n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003723AD2
Nitrate/sulfonate/bicarbonate ABC transport system permease protein {ECO:0000313|EMBL:ELX10808.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
nitrate/sulfonate/bicarbonate ABC transporter permease
H1-18-all-fractions_k255_6175555_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9929..10900)
DNA (972bp) protein (324aa)
myristoyl transferase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037B402A
Myristoyl transferase {ECO:0000313|EMBL:KGF79404.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
H1-18-all-fractions_k255_6175555_12
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11131..12498
DNA (1368bp) protein (456aa)
signal recognition particle protein Srp54 n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000374AD01
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
ffh; signal recognition particle protein
H1-18-all-fractions_k255_6175555_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12735..13136
DNA (402bp) protein (134aa)
SWIB/MDM2 domain containing protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PGT2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF79406.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
SWIB/MDM2 domain protein
H1-18-all-fractions_k255_6175555_14
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13408..14208)
DNA (801bp) protein (267aa)
Transcriptional regulator (EC:2.6.1.1)
Transcriptional regulator {ECO:0000313|EMBL:AIY39912.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AIY39912.1};; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
GntR family transcriptional regulator n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003736F0E
Displaying 14 items

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