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H1-18-all-fractions_k255_7321103

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_7321103_1
unknown

Not on your lists

comp(2..151)
DNA (150bp) protein (50aa)

This feature has no annotations

H1-18-all-fractions_k255_7321103_2
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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803..1408
DNA (606bp) protein (202aa)
RNA polymerase sigma factor n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P0C9_AROAE
rpoE; RNA polymerase sigma factor RpoE
Tax=CG_Rhodof_03
H1-18-all-fractions_k255_7321103_3
unknown

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1598..1990
DNA (393bp) protein (131aa)

This feature has no annotations

H1-18-all-fractions_k255_7321103_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2030..3940)
DNA (1911bp) protein (637aa)
asnB; asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Campylobacter concisus (strain 13826) RepID=A7ZF04_CAMC1
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:KGJ93584.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio psychroerythus).;"
H1-18-all-fractions_k255_7321103_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4111..5568)
DNA (1458bp) protein (486aa)
multidrug MFS transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA73A
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAO40876.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
EmrB/QacA family drug resistance transporter
H1-18-all-fractions_k255_7321103_6
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5778..6128
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037D7722
Uncharacterized protein {ECO:0000313|EMBL:EKU79991.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
H1-18-all-fractions_k255_7321103_7
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6247..6984
DNA (738bp) protein (246aa)
KR domain protein n=2 Tax=Burkholderia cenocepacia RepID=T0FRV3_9BURK
Short-chain dehydrogenase {ECO:0000313|EMBL:KIF83143.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
putative dehydrogenase
H1-18-all-fractions_k255_7321103_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7158..8771
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCX1_9BURK
Blue light sensor protein {ECO:0000313|EMBL:KGF82566.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
zraS8; sensory box histidine kinase/response regulator
H1-18-all-fractions_k255_7321103_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8778..9236)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DZ75_9BURK
Chemotaxis protein CheY {ECO:0000313|EMBL:KGF82565.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
response regulator receiver protein
H1-18-all-fractions_k255_7321103_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9244..11490)
DNA (2247bp) protein (749aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000367C46E
ATPase {ECO:0000313|EMBL:KGF82564.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
multi-sensor signal transduction histidine kinase
H1-18-all-fractions_k255_7321103_11
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11856..14123
DNA (2268bp) protein (756aa)
Tyrosine-protein kinase Wzc (EC:2.7.10.2)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036CDDD0
Exopolysaccharide transporter {ECO:0000313|EMBL:EKU80448.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
H1-18-all-fractions_k255_7321103_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14156..15919)
DNA (1764bp) protein (588aa)
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYX3_VARPE
Variovorax paradoxus strain MEDvA23 contig_48, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28439.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
ABC transporter
H1-18-all-fractions_k255_7321103_13
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16270..16800
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W0H1_9BURK
putative uncharacterized protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
H1-18-all-fractions_k255_7321103_14
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17222..17647
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PNV3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC19211.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
H1-18-all-fractions_k255_7321103_15
Pseudomonas sp. H2, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17650..18588
DNA (939bp) protein (313aa)
Putative L-serine dehydratase n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1IBX4_PSEE4
Serine dehydratase {ECO:0000313|EMBL:KGI92956.1}; TaxID=658612 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. H2.;"
serine dehydratase
H1-18-all-fractions_k255_7321103_16
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18592..19896)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DZ80_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82535.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
X-Pro dipeptidyl-peptidase family protein
H1-18-all-fractions_k255_7321103_17
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20037..21704
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DGX4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82536.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
transporter
H1-18-all-fractions_k255_7321103_18
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21723..22799
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DV31_9BURK
Secretion protein HlyD family protein {ECO:0000313|EMBL:KFC68476.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
DSBA oxidoreductase
H1-18-all-fractions_k255_7321103_19
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22796..24235
DNA (1440bp) protein (480aa)
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DE59_9BURK
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein {ECO:0000313|EMBL:KFC68475.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
H1-18-all-fractions_k255_7321103_20
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24355..26082
DNA (1728bp) protein (576aa)
membrane protein n=1 Tax=Janthinobacterium lividum RepID=UPI000287CFB0
Membrane protein {ECO:0000313|EMBL:KHA80153.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
HAMP domain protein
H1-18-all-fractions_k255_7321103_21
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26226..26495
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035E559A
DTW domain containing protein {ECO:0000313|EMBL:KFC68474.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
DTW domain containing protein
Displaying 21 items

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