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H1-18-all-fractions_k255_7743472

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_7743472_1
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..994
DNA (993bp) protein (331aa)
putative circadian clock protein KaiC (EC:2.7.11.1)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036653D0
Uncharacterized protein {ECO:0000313|EMBL:KJS22004.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
H1-18-all-fractions_k255_7743472_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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991..2229
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037DC089
sensory box histidine kinase/response regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
H1-18-all-fractions_k255_7743472_3
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2419..3885
DNA (1467bp) protein (489aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
zwf; glucose-6-phosphate dehydrogenase (EC:1.1.1.49)
glucose 6-phosphate dehydrogenase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003663C97
H1-18-all-fractions_k255_7743472_4
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3996..4850
DNA (855bp) protein (285aa)
RpiR family transcriptional regulator n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000348B3C6
helix-turn-helix domain, rpiR family protein
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:CDG81936.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_7743472_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(5000..6325)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000364DB89
FMN-dependent alpha-hydroxy acid dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
H1-18-all-fractions_k255_7743472_6
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6502..6714
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0003176FDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFC72051.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
H1-18-all-fractions_k255_7743472_7
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6711..7493
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
map; methionine aminopeptidase, type I (EC:3.4.11.18)
methionine aminopeptidase n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036D629B
H1-18-all-fractions_k255_7743472_8
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7561..7854)
DNA (294bp) protein (98aa)
Pentapeptide MXKDX repeat protein n=1 Tax=Serratia proteamaculans (strain 568) RepID=A8GBX5_SERP5
Uncharacterized protein {ECO:0000313|EMBL:KHA76632.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein
H1-18-all-fractions_k255_7743472_9
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7909..8688)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S3H9_9BURK
Sulfite oxidase-related enzymes
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG18175.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
H1-18-all-fractions_k255_7743472_10
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8705..9304)
DNA (600bp) protein (200aa)
cytochrome B561 n=1 Tax=Burkholderia kururiensis RepID=UPI00034BECEC
Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) {ECO:0000313|EMBL:EJL92612.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
prokaryotic cytochrome b561 family protein
H1-18-all-fractions_k255_7743472_11
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9478..9981
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035EF5BB
GAF domain protein {ECO:0000313|EMBL:KFC65867.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
Free methionine-(R)-sulfoxide reductase
H1-18-all-fractions_k255_7743472_12
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9992..10999)
DNA (1008bp) protein (336aa)
MerR family transcriptional regulator n=1 Tax=Burkholderia pseudomallei RepID=UPI00016B0D89
Transcriptional regulator MerR family protein {ECO:0000313|EMBL:KFC72126.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
MerR family transcriptional regulator
H1-18-all-fractions_k255_7743472_13
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11204..13870
DNA (2667bp) protein (889aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036B446D
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor {ECO:0000313|EMBL:ELX11461.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
H1-18-all-fractions_k255_7743472_14
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13887..14666)
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABB11566.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABB11566.1};; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia sp. (strain 383) RepID=Q396P5_BURS3
H1-18-all-fractions_k255_7743472_15
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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14773..15699
DNA (927bp) protein (309aa)
Transcriptional regulator n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJ43_AZOSU
Transcriptional regulator {ECO:0000313|EMBL:KJV34889.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
transcriptional regulator
H1-18-all-fractions_k255_7743472_16
unknown

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comp(15722..16111)
DNA (390bp) protein (130aa)

This feature has no annotations

H1-18-all-fractions_k255_7743472_17
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16278..17210
DNA (933bp) protein (311aa)
tal; transaldolase (EC:2.2.1.2)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|SAAS:SAAS00118670};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
transaldolase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000382084E
H1-18-all-fractions_k255_7743472_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17386..18000)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000373C633
Uncharacterized protein {ECO:0000313|EMBL:KGF81271.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
TetR family transcriptional regulator
H1-18-all-fractions_k255_7743472_19
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18141..19424
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000375B9B6
Multidrug transporter {ECO:0000313|EMBL:KFI06997.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
RND family efflux transporter MFP subunit
H1-18-all-fractions_k255_7743472_20
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19443..22598
DNA (3156bp) protein (1052aa)
acriflavine resistance protein B n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000378E6CB
Acriflavine resistance protein B {ECO:0000313|EMBL:KFI06998.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hydrophobe/amphiphile efflux-1 (HAE1) family protein
H1-18-all-fractions_k255_7743472_21
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22595..24001
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037287D5
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein {ECO:0000313|EMBL:KFC65862.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
RND efflux system outer membrane lipoprotein
H1-18-all-fractions_k255_7743472_22
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24200..25768
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D8L5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU81019.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
putative methyl-accepting chemotaxis protein
H1-18-all-fractions_k255_7743472_23
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25958..27226)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DWE4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82937.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
radical SAM superfamily protein
H1-18-all-fractions_k255_7743472_24
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(27223..27819)
DNA (597bp) protein (199aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
nucleoside-triphosphate diphosphatase n=1 Tax=Herbaspirillum lusitanum RepID=UPI00031AAC6E
rdgB; non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
H1-18-all-fractions_k255_7743472_25
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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28047..29861
DNA (1815bp) protein (605aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00036959E0
hybrid histidine kinase
Candidate histidine kinase, hybrid {ECO:0000313|EMBL:AEG93241.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
H1-18-all-fractions_k255_7743472_26
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(29999..30727)
DNA (729bp) protein (243aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PFV3_9BURK
H1-18-all-fractions_k255_7743472_27
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30753..31700)
DNA (948bp) protein (316aa)
Protein phosphatase PrpC {ECO:0000313|EMBL:ELX10267.1}; EC=3.1.3.16 {ECO:0000313|EMBL:ELX10267.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000371B94B
Protein phosphatase 2C-like
H1-18-all-fractions_k255_7743472_28
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(31714..32730)
DNA (1017bp) protein (339aa)
protein kinase (EC:2.7.1.-)
Serine/threonine protein kinase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PHB7_9BURK
Serine/threonine protein kinase {ECO:0000313|EMBL:ELX10268.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
H1-18-all-fractions_k255_7743472_29
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32805..33692
DNA (888bp) protein (296aa)
stress-induced protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037B789A
Stress-induced protein {ECO:0000313|EMBL:KFI07006.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
conserved hypothetical protein
H1-18-all-fractions_k255_7743472_30
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33767..34411
DNA (645bp) protein (215aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
gmk; guanylate kinase (EC:2.7.4.8)
guanylate kinase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000364C256
Displaying items 1-30 of 32 in total

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