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H1-18-all-fractions_k255_1124089_30

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(27192..27902)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 236.0
  • Bit_score: 411
  • Evalue 6.00e-112
Pseudouridine synthase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DDT6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 236.0
  • Bit_score: 403
  • Evalue 1.20e-109
conserved hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 236.0
  • Bit_score: 395
  • Evalue 9.00e-108

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Taxonomy

Massilia sp. LC238 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGAGTAAATTATCCCTGGACCGCATCCTCCAATCGCAAGGTTTTGGCACCCGTAAATACTGCCGCGCCCTCATCGAAGACGGTGACGTCGCCGTCGACGGCGCCGTCCACACCAACTATAAAACGACGTTCGAGACCGAAGGCCTCTTGCTGACGGTGTTCGACGAAGCCTGTCCGGTACGGGAAAAAGTCTACCTCGCCCTGTATAAACCCGCCAATTTCGAATGTTCGCGCAAGCCCAGCCACCACCCCGGCGTGCTCACGCTGTTGCCGGAACAGATGACCTGGCGCGATGTGCAGCCCGTCGGCAGACTGGATCATGACACCACCGGTTTGCTGTTGATGAGCGACGATGGCCCGTTTATCCACGCCCAGTCCTCGCCCAAGCGCCACGTGCCGAAGGTCTACCAGGCCACCACTGCCGAGCCCGTTACAGACGCCCTGATTGCCCAAATGCTCGCTGGAGTACAGTTGCACGACGAGCCAGCGCCCCTGAAAGCCATCAGTTGTGTGCAGCGCGGTGAGTTCGTCCTCGAAATCGTGCTGGAACAGGGCAAATATCACCAGGTCAAGCGCATGCTGGCGGCCGCCGGCAACCACTGCGCCGCCTTGCACCGCTCGGCTATCGGCACGCTCACGCTGGCGTCGCTGGACATCGGCGAAGGCGAGTGGTGTTATCTGGAACCCTCCCACCTTGCCTTGCTGGCTTGA
PROTEIN sequence
Length: 237
MSKLSLDRILQSQGFGTRKYCRALIEDGDVAVDGAVHTNYKTTFETEGLLLTVFDEACPVREKVYLALYKPANFECSRKPSHHPGVLTLLPEQMTWRDVQPVGRLDHDTTGLLLMSDDGPFIHAQSSPKRHVPKVYQATTAEPVTDALIAQMLAGVQLHDEPAPLKAISCVQRGEFVLEIVLEQGKYHQVKRMLAAAGNHCAALHRSAIGTLTLASLDIGEGEWCYLEPSHLALLA*