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H1-18-all-fractions_k255_1124089

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_1124089_1
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..208)
DNA (207bp) protein (69aa)
Flagellar hook-associated protein FlgK n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DHX2_9BURK
flgK; flagellar hook-associated protein FlgK
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:EKU82886.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
H1-18-all-fractions_k255_1124089_2
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(310..1227)
DNA (918bp) protein (306aa)
Flagellar rod assembly protein/muramidase FlgJ {ECO:0000313|EMBL:ELX10309.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ELX10309.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035C9424
flgJ; flagellar rod assembly protein/muramidase FlgJ
H1-18-all-fractions_k255_1124089_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1240..2343)
DNA (1104bp) protein (368aa)
flagellar P-ring protein FlgI n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003688E1E
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
flagellar P-ring family protein
H1-18-all-fractions_k255_1124089_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2355..2966)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003696622
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flagellar L-ring family protein
H1-18-all-fractions_k255_1124089_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3020..3802)
DNA (783bp) protein (261aa)
flagellar basal body rod protein FlgG n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036424C9
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:KGF81327.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flgG; flagellar basal-body rod protein FlgG
H1-18-all-fractions_k255_1124089_6
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3868..4608)
DNA (741bp) protein (247aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DHW9_9BURK
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:EKU82881.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
flgF; flagellar basal-body rod protein FlgF
H1-18-all-fractions_k255_1124089_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4638..6170)
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036766B5
Flagellar hook protein FlgE {ECO:0000313|EMBL:KGF81329.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flgE; flagellar hook protein flgE
H1-18-all-fractions_k255_1124089_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6216..6935)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036C8D3B
FlgD flagellar hook capping protein {ECO:0000313|EMBL:KFC69689.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
flgD; basal-body rod modification protein flgD
H1-18-all-fractions_k255_1124089_9
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6950..7351)
DNA (402bp) protein (134aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DFC3_9BURK
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
flgC; flagellar basal-body rod protein FlgC
H1-18-all-fractions_k255_1124089_10
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7354..7773)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000362FB20
flgB; flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_1124089_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7940..8638
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000364E491
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flgA; flagella basal body P-ring formation protein FlgA
H1-18-all-fractions_k255_1124089_12
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8757..9059
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000377240E
Flagellar biosynthesis anti-sigma factor FlgM {ECO:0000313|EMBL:KFC69693.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
anti-sigma-28 factor, FlgM family protein
H1-18-all-fractions_k255_1124089_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9066..9530
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035C18E6
Uncharacterized protein {ECO:0000313|EMBL:KGF81335.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flgN family protein
H1-18-all-fractions_k255_1124089_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9723..10847
DNA (1125bp) protein (375aa)
peptidyl-Lys metalloendopeptidase (EC:3.4.24.20)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037D7844
Uncharacterized protein {ECO:0000313|EMBL:KGF81337.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_1124089_15
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10988..11962)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036D80E0
potassium-tellurite ethidium and proflavin transporter
Blr5158 protein {ECO:0000313|EMBL:BAC50423.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
H1-18-all-fractions_k255_1124089_16
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12202..12726)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000365472A
Uncharacterized protein {ECO:0000313|EMBL:KFC69437.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
H1-18-all-fractions_k255_1124089_17
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12819..13568)
DNA (750bp) protein (250aa)
flagellar motor protein MotD n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003634787
ompA family protein
OmpA family protein {ECO:0000313|EMBL:CDG81870.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_1124089_18
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13583..14335)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003778C39
Uncharacterized protein {ECO:0000313|EMBL:EKU82855.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
motA/TolQ/ExbB proton channel family protein
H1-18-all-fractions_k255_1124089_19
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14317..15045)
DNA (729bp) protein (243aa)
flagellar biosynthesis sigma factor n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000366D901
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
fliA; RNA polymerase sigma factor for flagellar operon
H1-18-all-fractions_k255_1124089_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15058..15876)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037A3C0F
Antiactivator of flagellar biosynthesis FleN protein {ECO:0000313|EMBL:KGF81342.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
fleN; fleN flagellar synthesis regulator
H1-18-all-fractions_k255_1124089_21
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15869..17164)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000377449C
SRP54-type , GTPase domain protein
SRP54-type , GTPase domain protein {ECO:0000313|EMBL:CDG81866.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_1124089_22
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17317..18735)
DNA (1419bp) protein (473aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Burkholderia sp. BT03 RepID=J2Q2E0_9BURK
Aldehyde dehydrogenase {ECO:0000313|EMBL:EYF05078.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
aldehyde dehydrogenase
H1-18-all-fractions_k255_1124089_23
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18856..19728)
DNA (873bp) protein (291aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AEK60643.1}; EC=1.1.1.133 {ECO:0000313|EMBL:AEK60643.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AI60_COLFT
H1-18-all-fractions_k255_1124089_24
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19725..20270)
DNA (546bp) protein (182aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:CDG81584.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CDG81584.1};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AI59_COLFT
H1-18-all-fractions_k255_1124089_25
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20274..21167)
DNA (894bp) protein (298aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
rmlA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AI58_COLFT
H1-18-all-fractions_k255_1124089_26
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21164..22192)
DNA (1029bp) protein (343aa)
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AI57_COLFT
H1-18-all-fractions_k255_1124089_27
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22356..24461)
DNA (2106bp) protein (702aa)
flagellar biosynthesis protein FlhA n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003782467
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:KHA77315.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
flhA; flagellar biosynthesis protein FlhA
H1-18-all-fractions_k255_1124089_28
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24458..25657)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037474CF
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:KFC69450.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
flhB; flagellar biosynthetic protein FlhB
H1-18-all-fractions_k255_1124089_29
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25819..27009)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000347CF2E
UDP-N-acetylmuramyl pentapeptide phosphotransferase {ECO:0000313|EMBL:KFC69448.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
glycosyl transferase
H1-18-all-fractions_k255_1124089_30
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27192..27902)
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
Pseudouridine synthase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DDT6_9BURK
conserved hypothetical protein
Displaying items 1-30 of 52 in total

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