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H1-18-all-fractions_k255_5255699_10

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(7726..9219)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-54 n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036FF201 similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 501.0
  • Bit_score: 801
  • Evalue 4.10e-229
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 500.0
  • Bit_score: 790
  • Evalue 1.00e-225
rpoN; RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 504.0
  • Bit_score: 781
  • Evalue 7.20e-224

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Taxonomy

Janthinobacterium lividum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGAAACAGTCACTTCAACTTCGCACCTCGCAGCACCTGGCGCTCACGCCGCAGCTGCAGCAGTCGATCCGCCTGCTGCAATTGTCGACGCTGGAATTGCACCAGGAGCTGGAACACCTGTTGTCTGACAATCCCCTGCTCGAGCGCCTCGACGATCCGCTCGACAATTCCGTGCGCCTGCTGGCCGATGGCGCCGTGGGCAGCAATGCCCCGGCTGAGGCGGCCCCCACCAACCAGGACGCGCCCACCGGCGACGCCCCGGCGACGGCAGCGGACGGCGAGGGCGGAGCGGAGACGCCCGAGATGGCCGGCGAGAGCGCCCAGGACAATGGCGGCGAAGGCGAGGACTGGAGCGAGGCATCGCGTAACAAGTCGCCCGACGATGAGGATTCGCGCCCGCAGATCGAGGCCTCGGCCACGAGCCTGCGCGACCATTTGATGGAGCAGATGCGCCTGGCCATGCTGGGCGTGCGCGACCGCGCGCTGGTCGAACTGATGGTCGATGCACTCGACGACAATGGCTATCTGACCGAGTCGCTTGAAGAGATCTTCGAGCGCATGCCGCCGGAACTGGAGATCGACCCGGACGAACTGAAAACGGCGCTGTCGCTACTGCAAAGTTTTGATCCGGCCGGCGTGGGCGCGCGCAATGCGGCCGAGTGCCTGGCCCTGCAAATCCGGCGCATGCCCGGCGTGGCCATGGTGACGCGGCGCATGGCCTTGCAGATCGTCAGCAATCACCTGGGCTGGTTTGCCCAGCGTGAATTCAACAAGCTGAAAAAAGCCCTCGACTGCGACGACGAAGACTTGCGCGAAGCCCAGTGCGTGATTCGCCAGTGCAATCCGCATCCAGGCGCGGCCTTCGGTGCGGGCGCGTCCGATTATGTAGTTCCCGATGTGATTGTGAAGAAGGTCAAGGGCGGCTGGACTGTAAGCCTGAACAATGACGTCATGCCGCGGCTGCGCGTGAACAGCATGTATGCCAACCTCCTCAAGCAGGGCAAAGGCGAAGGCCAGCTGGGCGCGCAGTTGCAGGAAGCGAAGTGGTTGATCAAAAATATGCGTCAGCGTTTCGACACCATCCTGCGCGTGGCCGAGGCAATTGTTGAGCGCCAACGGAACTTTTTTTCCCATGGCGCGGTTGCCATGCGTCCACTTGTGCTGCGTGAAATTGCTGATACACTGGGTCTACACGAGAGCACTATCTCTCGGGTAACAACTCAGAAATACATGCTCACACCGCATGGTATGTTTGAGTTGAAATATTTTTTTGGTAGTCACGTAGCGACCGACGCCGGCGGCGAAGCATCGTCGACAGCGATCCGGGCACTCATCGTGCAATTGACAGGAGCGGAAGACCCTAAAAATCCACTTTCAGACAGCAAGATCGCAGACATGCTGGGGGAACAGGGGATGGTCATTGCGCGCCGTACGGTTGCCAAATACCGTGAAGCGCTCAAGATCCCACCCGTCGCTCTCCGCAAGAGTTTGTGA
PROTEIN sequence
Length: 498
MKQSLQLRTSQHLALTPQLQQSIRLLQLSTLELHQELEHLLSDNPLLERLDDPLDNSVRLLADGAVGSNAPAEAAPTNQDAPTGDAPATAADGEGGAETPEMAGESAQDNGGEGEDWSEASRNKSPDDEDSRPQIEASATSLRDHLMEQMRLAMLGVRDRALVELMVDALDDNGYLTESLEEIFERMPPELEIDPDELKTALSLLQSFDPAGVGARNAAECLALQIRRMPGVAMVTRRMALQIVSNHLGWFAQREFNKLKKALDCDDEDLREAQCVIRQCNPHPGAAFGAGASDYVVPDVIVKKVKGGWTVSLNNDVMPRLRVNSMYANLLKQGKGEGQLGAQLQEAKWLIKNMRQRFDTILRVAEAIVERQRNFFSHGAVAMRPLVLREIADTLGLHESTISRVTTQKYMLTPHGMFELKYFFGSHVATDAGGEASSTAIRALIVQLTGAEDPKNPLSDSKIADMLGEQGMVIARRTVAKYREALKIPPVALRKSL*